Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR4796-201ENST00000580742 81 ntBASIC1.65□□□□□ -2.15
SSBP3Q9BWW4 MIR5002-201ENST00000584713 97 ntBASIC1.65□□□□□ -2.15
SSBP3Q9BWW4 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.65□□□□□ -2.15
SSBP3Q9BWW4 uc_338.20-201ENST00000621563 178 ntBASIC1.65□□□□□ -2.15
SSBP3Q9BWW4 MIR7843-201ENST00000622274 79 ntBASIC1.65□□□□□ -2.15
SSBP3Q9BWW4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 RNU6-478P-201ENST00000363904 110 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 SNORA25.9-201ENST00000365087 128 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 MIR1289-2-201ENST00000408360 111 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 AL450471.1-201ENST00000447509 127 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 AL133373.1-201ENST00000497098 94 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 RNU6-557P-201ENST00000516842 110 ntBASIC1.64□□□□□ -2.15
SSBP3Q9BWW4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SSBP3Q9BWW4 RNU6-811P-201ENST00000384069 107 ntBASIC1.63□□□□□ -2.15
SSBP3Q9BWW4 MIR583-201ENST00000384846 75 ntBASIC1.63□□□□□ -2.15
SSBP3Q9BWW4 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
SSBP3Q9BWW4 RNU11-2P-201ENST00000516898 142 ntBASIC1.63□□□□□ -2.15
SSBP3Q9BWW4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 SNORD36A-201ENST00000362874 73 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 RNU4-58P-201ENST00000363192 141 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 RNU6-686P-201ENST00000364839 107 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 MIR516A2-201ENST00000384888 90 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 MIR516A1-201ENST00000385033 90 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 RNA5SP233-201ENST00000459153 113 ntBASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SSBP3Q9BWW4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 AL161722.3-201ENST00000605789 2983 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 SNORA63.2-201ENST00000362603 126 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 RNU6-466P-201ENST00000391224 103 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 SNORD93-201ENST00000408813 74 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 Y_RNA.660-201ENST00000516002 120 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 RNA5SP182-201ENST00000516064 82 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 RNU6-250P-201ENST00000516958 103 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.61□□□□□ -2.15
SSBP3Q9BWW4 MIR377-201ENST00000362145 69 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR548U-201ENST00000390728 81 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 RNU6-531P-201ENST00000516694 104 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR4287-201ENST00000579398 78 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR5089-201ENST00000580047 84 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR4491-201ENST00000581087 68 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR3124-201ENST00000582636 67 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR8074-201ENST00000615081 81 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SSBP3Q9BWW4 MIR103A2-201ENST00000362154 78 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 RNU6-161P-201ENST00000363051 106 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 MIR18B-201ENST00000454574 71 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 FGF7P7-201ENST00000514120 227 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 SNORA18.5-201ENST00000516616 101 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 SNORA77B-201ENST00000578179 125 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 SNORD92-201ENST00000585078 85 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 MIR6516-201ENST00000630554 81 ntBASIC1.59□□□□□ -2.15
SSBP3Q9BWW4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SSBP3Q9BWW4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SSBP3Q9BWW4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
SSBP3Q9BWW4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 RNA5SP264-201ENST00000363115 107 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 RNU6-403P-201ENST00000363163 104 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 RNA5SP292-201ENST00000390974 118 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 AC244636.1-201ENST00000421152 228 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 AL591806.2-201ENST00000433122 173 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 snoU13.23-201ENST00000458863 104 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 AL627230.6-201ENST00000611129 280 ntBASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP3Q9BWW4 MIR101-2-201ENST00000362195 79 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 MIR676-201ENST00000390702 67 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 SNORA40.18-201ENST00000391200 128 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 MIR1185-1-201ENST00000408598 86 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 SNORD63B-201ENST00000411005 70 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 SNORA25.16-201ENST00000516741 121 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 AC104996.3-201ENST00000590718 94 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 SNRPGP19-201ENST00000603826 189 ntBASIC1.57□□□□□ -2.16
SSBP3Q9BWW4 AC012493.3-201ENST00000604494 112 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms