Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RNA5SP245-201ENST00000364239 121 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 Y_RNA.476-201ENST00000384347 108 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 RNU6-239P-201ENST00000390990 99 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 Y_RNA.793-201ENST00000411222 111 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 RNU6-240P-201ENST00000516098 97 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 RNU2-60P-201ENST00000517290 128 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 AC130289.1-201ENST00000577321 73 ntBASIC0.11□□□□□ -2.39
SDF4Q9BRK5 SNORA9.1-201ENST00000362412 131 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 RNA5SP325-201ENST00000363756 130 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 RNU6-463P-201ENST00000384340 107 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 RNU7-121P-201ENST00000516604 62 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 AL359881.1-201ENST00000602916 267 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 AC021443.1-201ENST00000604478 211 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 AC072026.1-201ENST00000605023 201 ntBASIC0.1□□□□□ -2.39
SDF4Q9BRK5 RNY1P2-201ENST00000364820 117 ntBASIC0.09□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.489-201ENST00000384410 101 ntBASIC0.09□□□□□ -2.4
SDF4Q9BRK5 RNU6-588P-201ENST00000410281 105 ntBASIC0.09□□□□□ -2.4
SDF4Q9BRK5 AC244505.6-201ENST00000452829 130 ntBASIC0.09□□□□□ -2.4
SDF4Q9BRK5 SNORA63.5-201ENST00000363548 123 ntBASIC0.08□□□□□ -2.4
SDF4Q9BRK5 RNA5SP457-201ENST00000363657 124 ntBASIC0.08□□□□□ -2.4
SDF4Q9BRK5 RNU4-84P-201ENST00000364200 139 ntBASIC0.08□□□□□ -2.4
SDF4Q9BRK5 RNU6-1318P-201ENST00000365389 103 ntBASIC0.08□□□□□ -2.4
SDF4Q9BRK5 RNU4-69P-201ENST00000410677 143 ntBASIC0.08□□□□□ -2.4
SDF4Q9BRK5 RNU7-164P-201ENST00000459221 62 ntBASIC0.08□□□□□ -2.4
SDF4Q9BRK5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.08□□□□□ -2.4
SDF4Q9BRK5 RNU6-574P-201ENST00000384265 107 ntBASIC0.07□□□□□ -2.4
SDF4Q9BRK5 RNU6-429P-201ENST00000384582 108 ntBASIC0.07□□□□□ -2.4
SDF4Q9BRK5 AL109933.3-201ENST00000619095 188 ntBASIC0.07□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.274-201ENST00000364714 101 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 SNORD18B-201ENST00000365659 72 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.644-201ENST00000459006 113 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.674-201ENST00000516362 113 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 AC022559.1-201ENST00000520905 205 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 AC138869.1-201ENST00000568623 124 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 MIR548H5-201ENST00000580314 60 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 DNAJC19P2-201ENST00000593340 302 ntBASIC0.06□□□□□ -2.4
SDF4Q9BRK5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
SDF4Q9BRK5 RNU6-187P-201ENST00000384139 106 ntBASIC0.05□□□□□ -2.4
SDF4Q9BRK5 MIR1270-201ENST00000459320 83 ntBASIC0.05□□□□□ -2.4
SDF4Q9BRK5 RNU7-123P-201ENST00000515911 60 ntBASIC0.05□□□□□ -2.4
SDF4Q9BRK5 AC105081.1-201ENST00000617727 106 ntBASIC0.05□□□□□ -2.4
SDF4Q9BRK5 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.144-201ENST00000363521 113 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.362-201ENST00000365518 110 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.584-201ENST00000391090 114 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 AL603914.1-201ENST00000401964 204 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 RNU7-10P-201ENST00000607194 63 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 AC141273.2-201ENST00000618989 130 ntBASIC0.04□□□□□ -2.4
SDF4Q9BRK5 SNORD115-24-201ENST00000363528 82 ntBASIC0.03□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.297-201ENST00000364950 91 ntBASIC0.03□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.298-201ENST00000364960 107 ntBASIC0.03□□□□□ -2.4
SDF4Q9BRK5 PCNPP3-201ENST00000393579 471 ntBASIC0.03□□□□□ -2.4
SDF4Q9BRK5 MIR2909-201ENST00000617113 69 ntBASIC0.03□□□□□ -2.4
SDF4Q9BRK5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.02□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.85-201ENST00000363014 111 ntBASIC0.02□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.240-201ENST00000364469 95 ntBASIC0.02□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 RNU6-726P-201ENST00000364680 107 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 SNORA2A-201ENST00000383885 135 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 MIR760-201ENST00000390220 80 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 RNU6-1321P-201ENST00000390905 107 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 SNORD37.2-201ENST00000391075 66 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 MIR3658-201ENST00000636291 56 ntBASIC0.01□□□□□ -2.41
SDF4Q9BRK5 RNU6-309P-201ENST00000364573 106 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 RNA5SP128-201ENST00000365305 116 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.690-201ENST00000516603 95 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 AP002392.1-201ENST00000537692 208 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 AC099654.10-201ENST00000640395 161 ntBASIC0□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 MIR206-201ENST00000384872 86 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 RNU6-127P-201ENST00000390897 107 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 SNORD77B-201ENST00000391112 67 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 RNU7-48P-201ENST00000458875 63 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 RNU7-161P-201ENST00000517289 62 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 MIR5190-201ENST00000581537 80 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 RNU1-29P-201ENST00000606574 126 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 AL162376.1-201ENST00000624117 175 ntBASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.01□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.02□□□□□ -2.41
SDF4Q9BRK5 RNY1P11-201ENST00000363759 113 ntBASIC-0.02□□□□□ -2.41
SDF4Q9BRK5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.02□□□□□ -2.41
SDF4Q9BRK5 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
SDF4Q9BRK5 RNU6-508P-201ENST00000363231 103 ntBASIC-0.03□□□□□ -2.41
SDF4Q9BRK5 RNA5SP403-201ENST00000363598 108 ntBASIC-0.03□□□□□ -2.41
SDF4Q9BRK5 MIR635-201ENST00000384830 98 ntBASIC-0.03□□□□□ -2.41
SDF4Q9BRK5 RPL39P34-201ENST00000477141 156 ntBASIC-0.03□□□□□ -2.41
SDF4Q9BRK5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
SDF4Q9BRK5 MIR4752-201ENST00000579672 72 ntBASIC-0.03□□□□□ -2.41
SDF4Q9BRK5 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
SDF4Q9BRK5 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms