Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNORA72.7-201ENST00000516349 94 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 Y_RNA.705-201ENST00000516862 110 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNU6-762P-201ENST00000517107 102 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 SNORA4-201ENST00000584302 138 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNU6-90P-201ENST00000606352 106 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 AP001362.1-201ENST00000625165 124 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TIMP4Q99727 MIR30D-201ENST00000362283 70 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 SNORA2B-201ENST00000384583 137 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 MT-TN-201ENST00000387400 73 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 U8.15-201ENST00000390947 134 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 MIR1304-201ENST00000408243 91 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 RNU11-2P-201ENST00000516898 142 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 AC026421.1-201ENST00000519101 163 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 MIR4500-201ENST00000579472 76 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
TIMP4Q99727 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
TIMP4Q99727 RNU6-813P-201ENST00000384691 107 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 Y_RNA.567-201ENST00000384736 106 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 RNU6-613P-201ENST00000410412 108 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 RNU6-887P-201ENST00000410660 100 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 AC103810.7-201ENST00000607821 91 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 AC012676.2-201ENST00000619258 186 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 U6.109-201ENST00000636749 87 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
TIMP4Q99727 Y_RNA.96-201ENST00000363092 109 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 RNA5SP133-201ENST00000363368 119 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 Y_RNA.168-201ENST00000363740 102 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 SNORD38.2-201ENST00000384470 69 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 RNU6-972P-201ENST00000391208 107 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 AC138749.4-201ENST00000563970 127 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 AC090897.1-201ENST00000580909 226 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 MIR4439-201ENST00000583746 80 ntBASIC1.32□□□□□ -2.2
TIMP4Q99727 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
TIMP4Q99727 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TIMP4Q99727 RNY1P2-201ENST00000364820 117 ntBASIC1.31□□□□□ -2.2
TIMP4Q99727 SNORD93-201ENST00000408813 74 ntBASIC1.31□□□□□ -2.2
TIMP4Q99727 snoU13.21-201ENST00000459368 105 ntBASIC1.31□□□□□ -2.2
TIMP4Q99727 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
TIMP4Q99727 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.31□□□□□ -2.2
TIMP4Q99727 Y_RNA.119-201ENST00000363301 96 ntBASIC1.3□□□□□ -2.2
TIMP4Q99727 SNORA26.2-201ENST00000390922 122 ntBASIC1.3□□□□□ -2.2
TIMP4Q99727 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.3□□□□□ -2.2
TIMP4Q99727 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
TIMP4Q99727 AL359821.1-201ENST00000605519 182 ntBASIC1.3□□□□□ -2.2
TIMP4Q99727 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
TIMP4Q99727 MIR494-201ENST00000349529 81 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 Y_RNA.17-201ENST00000362433 111 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 SNORD58A-201ENST00000383875 65 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 Y_RNA.388-201ENST00000383919 113 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 RNY4P29-201ENST00000410801 97 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 RNU6-1054P-201ENST00000411293 104 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 AC015818.7-201ENST00000428754 109 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 AC087499.7-201ENST00000441958 109 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 AC023827.1-201ENST00000569247 97 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 AC062037.1-201ENST00000605302 128 ntBASIC1.29□□□□□ -2.2
TIMP4Q99727 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
TIMP4Q99727 Y_RNA.4-201ENST00000362333 112 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 RNU6-403P-201ENST00000363163 104 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 RNU6-1244P-201ENST00000363614 108 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 RNU6-580P-201ENST00000365159 107 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 Y_RNA.363-201ENST00000365529 113 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 SNORA72.6-201ENST00000384520 129 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 MIR181B2-201ENST00000385004 89 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 SNORA75.2-201ENST00000391138 150 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 SNORA75.3-201ENST00000391231 150 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
TIMP4Q99727 MIR1302-4-201ENST00000408701 150 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 BX276092.1-201ENST00000427368 251 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 MIR4491-201ENST00000581087 68 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
TIMP4Q99727 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
TIMP4Q99727 RNY1P10-201ENST00000363268 113 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 Y_RNA.164-201ENST00000363709 102 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 Y_RNA.173-201ENST00000363776 113 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TIMP4Q99727 MIR18B-201ENST00000454574 71 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 SNORA25.16-201ENST00000516741 121 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms