Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNA5SP181-201ENST00000410246 98 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 AC097510.1-201ENST00000510945 133 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 RNU6-1194P-201ENST00000516208 104 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 SNORA4-201ENST00000584302 138 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 AC092634.7-201ENST00000621022 103 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM47Q96LD4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
TRIM47Q96LD4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRIM47Q96LD4 MIR588-201ENST00000384900 83 ntBASIC2.72□□□□□ -1.97
TRIM47Q96LD4 RPS27P16-201ENST00000425758 201 ntBASIC2.72□□□□□ -1.97
TRIM47Q96LD4 AC244023.1-201ENST00000426884 112 ntBASIC2.72□□□□□ -1.97
TRIM47Q96LD4 SUB1P4-201ENST00000566062 339 ntBASIC2.72□□□□□ -1.97
TRIM47Q96LD4 AC242498.1-201ENST00000604134 111 ntBASIC2.72□□□□□ -1.97
TRIM47Q96LD4 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
TRIM47Q96LD4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.72□□□□□ -1.97
TRIM47Q96LD4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
TRIM47Q96LD4 RNU6-369P-201ENST00000362515 102 ntBASIC2.71□□□□□ -1.98
TRIM47Q96LD4 AL606490.4-201ENST00000423117 127 ntBASIC2.71□□□□□ -1.98
TRIM47Q96LD4 AC099513.1-201ENST00000490423 301 ntBASIC2.71□□□□□ -1.98
TRIM47Q96LD4 RNU11-2P-201ENST00000516898 142 ntBASIC2.71□□□□□ -1.98
TRIM47Q96LD4 MIR4709-201ENST00000577272 72 ntBASIC2.71□□□□□ -1.98
TRIM47Q96LD4 BX510359.4-201ENST00000423750 193 ntBASIC2.7□□□□□ -1.98
TRIM47Q96LD4 AC026271.5-201ENST00000577873 130 ntBASIC2.7□□□□□ -1.98
TRIM47Q96LD4 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.7□□□□□ -1.98
TRIM47Q96LD4 TRDV1-202ENST00000621643 102 ntBASIC2.7□□□□□ -1.98
TRIM47Q96LD4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TRIM47Q96LD4 SNORA24B-201ENST00000384176 131 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 RNU6-1184P-201ENST00000384588 108 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 SNORA64-201ENST00000384674 134 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 MIR563-201ENST00000385080 79 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 AC009474.2-201ENST00000451383 136 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 RNU7-26P-201ENST00000458980 63 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 RNA5SP437-201ENST00000517249 129 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 MIR466-201ENST00000580653 84 ntBASIC2.69□□□□□ -1.98
TRIM47Q96LD4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM47Q96LD4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM47Q96LD4 RNU6-664P-201ENST00000362381 107 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 RNU6-446P-201ENST00000362827 106 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 RNA5SP117-201ENST00000365294 118 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 RNU7-41P-201ENST00000515917 61 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 RNU6-531P-201ENST00000516694 104 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 MIR4696-201ENST00000581431 70 ntBASIC2.68□□□□□ -1.98
TRIM47Q96LD4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM47Q96LD4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
TRIM47Q96LD4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
TRIM47Q96LD4 MIR424-201ENST00000362227 98 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 MIR30D-201ENST00000362283 70 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 SNORD101-201ENST00000384027 73 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 MIR520A-201ENST00000384862 85 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 MIR597-201ENST00000384968 97 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 RNU7-195P-201ENST00000458793 62 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 MIR6740-201ENST00000618268 113 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
TRIM47Q96LD4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM47Q96LD4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM47Q96LD4 MIR21-201ENST00000362134 72 ntBASIC2.66□□□□□ -1.98
TRIM47Q96LD4 MIR29C-201ENST00000385231 88 ntBASIC2.66□□□□□ -1.98
TRIM47Q96LD4 RNU6-982P-201ENST00000516216 102 ntBASIC2.66□□□□□ -1.98
TRIM47Q96LD4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM47Q96LD4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM47Q96LD4 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
TRIM47Q96LD4 AC022202.1-201ENST00000613515 211 ntBASIC2.66□□□□□ -1.98
TRIM47Q96LD4 RNA5SP192-201ENST00000364404 120 ntBASIC2.65□□□□□ -1.99
TRIM47Q96LD4 SNORA67.3-201ENST00000384366 140 ntBASIC2.65□□□□□ -1.99
TRIM47Q96LD4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.65□□□□□ -1.99
TRIM47Q96LD4 snoU13.27-201ENST00000459278 104 ntBASIC2.65□□□□□ -1.99
TRIM47Q96LD4 AP000942.3-201ENST00000603702 160 ntBASIC2.65□□□□□ -1.99
TRIM47Q96LD4 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM47Q96LD4 U6.100-201ENST00000636230 99 ntBASIC2.65□□□□□ -1.99
TRIM47Q96LD4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM47Q96LD4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TRIM47Q96LD4 RNU4-58P-201ENST00000363192 141 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 SNORA25.5-201ENST00000363782 126 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 RNU6-1052P-201ENST00000411398 104 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 TRAJ51-201ENST00000504127 63 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 RNU6-719P-201ENST00000516671 104 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 SNORA25.16-201ENST00000516741 121 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 RNA5SP137-201ENST00000516833 135 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 MIR5007-201ENST00000583098 95 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 PRELID3BP2-201ENST00000605362 201 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 MIR219B-201ENST00000637023 88 ntBASIC2.64□□□□□ -1.99
TRIM47Q96LD4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM47Q96LD4 RNU6-940P-201ENST00000363433 104 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 Y_RNA.226-201ENST00000364337 114 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 RNU6-654P-201ENST00000364373 107 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 RNU6-53P-201ENST00000365367 106 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 U8.13-201ENST00000390842 128 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 RNU6-1165P-201ENST00000410119 107 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 RNU6-542P-201ENST00000516405 103 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 RNU6-295P-201ENST00000516901 104 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 MIR7111-201ENST00000619751 72 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 MIR4773-1-201ENST00000637203 78 ntBASIC2.63□□□□□ -1.99
TRIM47Q96LD4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM47Q96LD4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms