Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
DNAAF1Q8NEP3 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
DNAAF1Q8NEP3 SNORD115-35-201ENST00000365122 82 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 SNORA36.2-201ENST00000384004 127 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 RNU6-80P-201ENST00000384195 107 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 RNU6-291P-201ENST00000384720 107 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 SUMO1P3-201ENST00000439961 304 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 RNU7-48P-201ENST00000458875 63 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 DEFB131E-201ENST00000532329 154 ntBASIC0.66□□□□□ -2.3
DNAAF1Q8NEP3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.71-201ENST00000362892 104 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 RNA5SP117-201ENST00000365294 118 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 MIR548D2-201ENST00000384955 97 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 MIR759-201ENST00000390224 91 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 MIR1255B1-201ENST00000636325 63 ntBASIC0.65□□□□□ -2.31
DNAAF1Q8NEP3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 SNORA31.14-201ENST00000516728 116 ntBASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.712-201ENST00000517011 92 ntBASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 MIR376B-201ENST00000614515 100 ntBASIC0.64□□□□□ -2.31
DNAAF1Q8NEP3 AL157777.2-201ENST00000258070 137 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.344-201ENST00000365381 112 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.346-201ENST00000365385 112 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-429P-201ENST00000384582 108 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-535P-201ENST00000384722 107 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-659P-201ENST00000516454 104 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 MIR3914-2-201ENST00000637339 95 ntBASIC0.63□□□□□ -2.31
DNAAF1Q8NEP3 MIR373-201ENST00000362273 69 ntBASIC0.62□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.127-201ENST00000363386 109 ntBASIC0.62□□□□□ -2.31
DNAAF1Q8NEP3 MIR644A-201ENST00000385262 94 ntBASIC0.62□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-521P-201ENST00000516663 105 ntBASIC0.62□□□□□ -2.31
DNAAF1Q8NEP3 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
DNAAF1Q8NEP3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.61□□□□□ -2.31
DNAAF1Q8NEP3 RNA5SP245-201ENST00000364239 121 ntBASIC0.61□□□□□ -2.31
DNAAF1Q8NEP3 AP001362.1-201ENST00000625165 124 ntBASIC0.61□□□□□ -2.31
DNAAF1Q8NEP3 RNY4P6-201ENST00000363667 96 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-865P-201ENST00000364772 107 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 SNORA25.9-201ENST00000365087 128 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-81P-201ENST00000365608 104 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 SNORD116-14-201ENST00000383894 92 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 SNORD116-17-201ENST00000383929 92 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 SNORD116-15-201ENST00000384445 92 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 SNORD116-19-201ENST00000384729 92 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 MIR6767-201ENST00000637302 66 ntBASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
DNAAF1Q8NEP3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 SNORA63.5-201ENST00000363548 123 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 SNORD18A-201ENST00000363753 72 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-959P-201ENST00000384671 107 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 MIR34C-201ENST00000384831 77 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 RNU6-679P-201ENST00000391003 106 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 TMSB4XP3-201ENST00000445144 114 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 MIR4500-201ENST00000579472 76 ntBASIC0.59□□□□□ -2.31
DNAAF1Q8NEP3 MIR101-2-201ENST00000362195 79 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 MIR96-201ENST00000362288 78 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 RNU4-67P-201ENST00000364569 141 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 AL353813.1-201ENST00000440700 253 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
DNAAF1Q8NEP3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 RNU6-363P-201ENST00000362895 105 ntBASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 RNA5SP517-201ENST00000364724 117 ntBASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 Y_RNA.362-201ENST00000365518 110 ntBASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 SNORD33.1-201ENST00000516213 88 ntBASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
DNAAF1Q8NEP3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 AL603908.1-201ENST00000406098 201 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 BX276092.1-201ENST00000427368 251 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 RNU6-469P-201ENST00000516253 101 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 MIR8070-201ENST00000616510 88 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
DNAAF1Q8NEP3 SNORD114-22-201ENST00000365423 72 ntBASIC0.55□□□□□ -2.32
DNAAF1Q8NEP3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.55□□□□□ -2.32
DNAAF1Q8NEP3 SNORA7.5-201ENST00000410672 110 ntBASIC0.55□□□□□ -2.32
DNAAF1Q8NEP3 RNU6-1333P-201ENST00000516162 93 ntBASIC0.55□□□□□ -2.32
DNAAF1Q8NEP3 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
DNAAF1Q8NEP3 RNU6-135P-201ENST00000516769 101 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms