Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNU6-355P-201ENST00000410427 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-791P-201ENST00000410467 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-705P-201ENST00000410601 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-1100P-201ENST00000410691 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-860P-201ENST00000410860 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-1217P-201ENST00000411276 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-785P-201ENST00000411324 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RN7SKP19-201ENST00000516016 252 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 U6.90-201ENST00000614007 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 U6.70-201ENST00000620287 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.280-201ENST00000364765 112 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 RNU6-1307P-201ENST00000391012 103 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 RNU4-69P-201ENST00000410677 143 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 RNU7-137P-201ENST00000516788 62 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 RNA5SP330-201ENST00000517096 96 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 AC090897.1-201ENST00000580909 226 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 MIR3133-201ENST00000583157 78 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.61□□□□□ -2.31
LYSMD4Q5XG99 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 RNU6-187P-201ENST00000384139 106 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.525-201ENST00000384570 113 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 RNU6-735P-201ENST00000410612 107 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 AL158147.1-201ENST00000443970 75 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 MTND5P34-201ENST00000568888 325 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 MIR6082-201ENST00000613604 109 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
LYSMD4Q5XG99 MIR18A-201ENST00000362310 71 ntBASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 RNY1P5-201ENST00000383890 115 ntBASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 U7.2-201ENST00000607576 63 ntBASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 U6.109-201ENST00000636749 87 ntBASIC0.59□□□□□ -2.31
LYSMD4Q5XG99 RNA5SP133-201ENST00000363368 119 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.258-201ENST00000364613 105 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.343-201ENST00000365354 112 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 RNU6-616P-201ENST00000384353 107 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 RNU6-1211P-201ENST00000459179 105 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 AC002350.1-201ENST00000490759 375 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 RNU6-531P-201ENST00000516694 104 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 RNU6-971P-201ENST00000516920 106 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 AC138749.4-201ENST00000563970 127 ntBASIC0.58□□□□□ -2.32
LYSMD4Q5XG99 RNU6-716P-201ENST00000365621 103 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 RNU6-1321P-201ENST00000390905 107 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.630-201ENST00000411370 108 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 RNU7-6P-201ENST00000516845 62 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.773-201ENST00000607168 90 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 AC087741.2-201ENST00000619415 172 ntBASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LYSMD4Q5XG99 MIR330-201ENST00000362196 94 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 RNU6-647P-201ENST00000364243 107 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 RNU6-1062P-201ENST00000383908 107 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 MIR206-201ENST00000384872 86 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 MIR644A-201ENST00000385262 94 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 SNORA40-201ENST00000388090 126 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 SNORD100-201ENST00000408573 76 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 DEFB131E-201ENST00000532329 154 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 AL109933.3-201ENST00000619095 188 ntBASIC0.56□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.85-201ENST00000363014 111 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.528-201ENST00000384575 108 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 RNU6-679P-201ENST00000391003 106 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.586-201ENST00000391146 98 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 RNU7-107P-201ENST00000459121 61 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 RNU6-1061P-201ENST00000516530 99 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 RNU6-1234P-201ENST00000516877 103 ntBASIC0.55□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.32-201ENST00000362589 110 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.119-201ENST00000363301 96 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 SNORD114-10-201ENST00000363409 72 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 RNA5SP245-201ENST00000364239 121 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.448-201ENST00000384185 108 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 SNORA31.14-201ENST00000516728 116 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 TUG1_4.1-201ENST00000619464 181 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 MIR1255B1-201ENST00000636325 63 ntBASIC0.54□□□□□ -2.32
LYSMD4Q5XG99 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.299-201ENST00000364973 94 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 SNORD58C-201ENST00000365223 64 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 RNU6-291P-201ENST00000384720 107 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.697-201ENST00000516776 113 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 Y_RNA.703-201ENST00000516846 111 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 MIR3678-201ENST00000578455 94 ntBASIC0.53□□□□□ -2.32
LYSMD4Q5XG99 SNORA63.5-201ENST00000363548 123 ntBASIC0.52□□□□□ -2.33
LYSMD4Q5XG99 RNY1P2-201ENST00000364820 117 ntBASIC0.52□□□□□ -2.33
LYSMD4Q5XG99 RNA5SP117-201ENST00000365294 118 ntBASIC0.52□□□□□ -2.33
LYSMD4Q5XG99 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms