Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RC3H1Q5TC82 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RC3H1Q5TC82 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RC3H1Q5TC82 MIR30D-201ENST00000362283 70 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 RNA5SP48-201ENST00000363969 126 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 SNORD115-31-201ENST00000365318 82 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 SNORA8.1-201ENST00000384250 140 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 RNU6-360P-201ENST00000390944 104 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 RNU4-37P-201ENST00000410214 84 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 RNA5SP247-201ENST00000411181 105 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.7□□□□□ -1.98
RC3H1Q5TC82 MIR6740-201ENST00000618268 113 ntBASIC2.7□□□□□ -1.98
RC3H1Q5TC82 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RC3H1Q5TC82 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RC3H1Q5TC82 Y_RNA.36-201ENST00000362602 112 ntBASIC2.69□□□□□ -1.98
RC3H1Q5TC82 RNU1-17P-201ENST00000363022 152 ntBASIC2.69□□□□□ -1.98
RC3H1Q5TC82 RNU6-957P-201ENST00000363652 99 ntBASIC2.69□□□□□ -1.98
RC3H1Q5TC82 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
RC3H1Q5TC82 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.68□□□□□ -1.98
RC3H1Q5TC82 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.68□□□□□ -1.98
RC3H1Q5TC82 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 RNU6-203P-201ENST00000384038 104 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 MTND4LP19-201ENST00000403051 166 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 snoU13.17-201ENST00000458802 104 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 RNU7-156P-201ENST00000517214 74 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 U1.36-201ENST00000620684 176 ntBASIC2.68□□□□□ -1.98
RC3H1Q5TC82 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.68□□□□□ -1.98
RC3H1Q5TC82 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RC3H1Q5TC82 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RC3H1Q5TC82 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RC3H1Q5TC82 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RC3H1Q5TC82 MIR942-201ENST00000401111 86 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 RNA5SP100-201ENST00000410903 110 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 RNA5SP59-201ENST00000410922 110 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 RNA5SP270-201ENST00000411361 118 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RC3H1Q5TC82 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.67□□□□□ -1.98
RC3H1Q5TC82 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RC3H1Q5TC82 Y_RNA.338-201ENST00000365320 114 ntBASIC2.66□□□□□ -1.98
RC3H1Q5TC82 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.66□□□□□ -1.98
RC3H1Q5TC82 RNU6-1165P-201ENST00000410119 107 ntBASIC2.66□□□□□ -1.98
RC3H1Q5TC82 AC093423.1-201ENST00000440817 142 ntBASIC2.66□□□□□ -1.98
RC3H1Q5TC82 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.66□□□□□ -1.98
RC3H1Q5TC82 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
RC3H1Q5TC82 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RC3H1Q5TC82 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RC3H1Q5TC82 RNU6-330P-201ENST00000363015 107 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 RNU6-396P-201ENST00000365369 105 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 MIR1302-7-201ENST00000408841 72 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 SNORD63B-201ENST00000411005 70 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 SNORD111.1-201ENST00000516421 86 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 MIR4498-201ENST00000577599 66 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 MIR4264-201ENST00000583520 66 ntBASIC2.65□□□□□ -1.99
RC3H1Q5TC82 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 Y_RNA.42-201ENST00000362660 108 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 MIR583-201ENST00000384846 75 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 MIR194-1-201ENST00000384892 85 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 AC004965.1-201ENST00000413033 213 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 RNU6-1194P-201ENST00000516208 104 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 SNORA31.17-201ENST00000516953 127 ntBASIC2.64□□□□□ -1.99
RC3H1Q5TC82 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
RC3H1Q5TC82 RNU6-1051P-201ENST00000365471 102 ntBASIC2.63□□□□□ -1.99
RC3H1Q5TC82 RNU6-154P-201ENST00000384306 106 ntBASIC2.63□□□□□ -1.99
RC3H1Q5TC82 RNU6-531P-201ENST00000516694 104 ntBASIC2.63□□□□□ -1.99
RC3H1Q5TC82 MIR3192-201ENST00000584920 77 ntBASIC2.63□□□□□ -1.99
RC3H1Q5TC82 AC005520.4-201ENST00000604337 90 ntBASIC2.63□□□□□ -1.99
RC3H1Q5TC82 RNU4-58P-201ENST00000363192 141 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 RNU6-340P-201ENST00000364005 107 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 RNU6-291P-201ENST00000384720 107 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 MT-TF-201ENST00000387314 71 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 AC079804.2-201ENST00000490376 200 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.62□□□□□ -1.99
RC3H1Q5TC82 MIR5694-201ENST00000581190 76 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 MIR6895-201ENST00000613497 78 ntBASIC2.62□□□□□ -1.99
RC3H1Q5TC82 SNORA3A-201ENST00000364113 130 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 Y_RNA.207-201ENST00000364142 106 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 SNORD23.1-201ENST00000408212 104 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 MIR4491-201ENST00000581087 68 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
RC3H1Q5TC82 RNU6-53P-201ENST00000365367 106 ntBASIC2.6□□□□□ -1.99
RC3H1Q5TC82 Y_RNA.371-201ENST00000365591 113 ntBASIC2.6□□□□□ -1.99
RC3H1Q5TC82 RNU7-62P-201ENST00000458856 62 ntBASIC2.6□□□□□ -1.99
RC3H1Q5TC82 SNORA25.16-201ENST00000516741 121 ntBASIC2.6□□□□□ -1.99
RC3H1Q5TC82 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.6□□□□□ -1.99
RC3H1Q5TC82 Y_RNA.164-201ENST00000363709 102 ntBASIC2.59□□□□□ -1.99
RC3H1Q5TC82 RNY4P3-201ENST00000365254 95 ntBASIC2.59□□□□□ -1.99
RC3H1Q5TC82 SNORD41-201ENST00000386967 70 ntBASIC2.59□□□□□ -1.99
RC3H1Q5TC82 RNU6-205P-201ENST00000390858 107 ntBASIC2.59□□□□□ -1.99
RC3H1Q5TC82 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.59□□□□□ -1.99
RC3H1Q5TC82 Y_RNA.783-201ENST00000613546 102 ntBASIC2.59□□□□□ -1.99
RC3H1Q5TC82 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -1.99
RC3H1Q5TC82 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RC3H1Q5TC82 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms