Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.68□□□□□ -2.14
SNAP47Q5SQN1 HSBP1P2-201ENST00000299671 229 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 RNU6-934P-201ENST00000365154 107 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 Y_RNA.342-201ENST00000365352 113 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 Y_RNA.369-201ENST00000365568 117 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 Y_RNA.467-201ENST00000384297 102 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 SNORD12-201ENST00000391002 90 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 RNU6-644P-201ENST00000391155 98 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 MIR1257-201ENST00000408490 117 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 SPINT5P-201ENST00000448174 155 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 RNU7-185P-201ENST00000459215 60 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 RNU6-90P-201ENST00000606352 106 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 MALAT1.1-201ENST00000618249 95 ntBASIC1.67□□□□□ -2.14
SNAP47Q5SQN1 AC008163.1-202ENST00000636004 2889 ntBASIC1.66□□□□□ -2.14
SNAP47Q5SQN1 Y_RNA.96-201ENST00000363092 109 ntBASIC1.66□□□□□ -2.14
SNAP47Q5SQN1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.66□□□□□ -2.14
SNAP47Q5SQN1 RNU6-1163P-201ENST00000364516 107 ntBASIC1.66□□□□□ -2.14
SNAP47Q5SQN1 RNU6-1131P-201ENST00000364955 107 ntBASIC1.66□□□□□ -2.14
SNAP47Q5SQN1 MIR4491-201ENST00000581087 68 ntBASIC1.66□□□□□ -2.14
SNAP47Q5SQN1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
SNAP47Q5SQN1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.65□□□□□ -2.15
SNAP47Q5SQN1 Y_RNA.705-201ENST00000516862 110 ntBASIC1.65□□□□□ -2.15
SNAP47Q5SQN1 MTND5P40-201ENST00000559945 246 ntBASIC1.65□□□□□ -2.15
SNAP47Q5SQN1 MIR4771-2-201ENST00000577758 74 ntBASIC1.65□□□□□ -2.15
SNAP47Q5SQN1 MIR4771-1-201ENST00000582617 74 ntBASIC1.65□□□□□ -2.15
SNAP47Q5SQN1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SNAP47Q5SQN1 MIR378A-201ENST00000362177 66 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 RNU6-813P-201ENST00000384691 107 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 AC015818.7-201ENST00000428754 109 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 AC087499.7-201ENST00000441958 109 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 RNU7-40P-201ENST00000516397 64 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 MIR4500-201ENST00000579472 76 ntBASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
SNAP47Q5SQN1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 Y_RNA.173-201ENST00000363776 113 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 Y_RNA.220-201ENST00000364244 109 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 RNU6-53P-201ENST00000365367 106 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 RNU6-49P-201ENST00000384256 107 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 MIR222-201ENST00000384992 110 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 SNORA25.16-201ENST00000516741 121 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 MIR4303-201ENST00000581299 66 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 RNU6-86P-201ENST00000606534 107 ntBASIC1.63□□□□□ -2.15
SNAP47Q5SQN1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU6-403P-201ENST00000363163 104 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU6-1244P-201ENST00000363614 108 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 Y_RNA.290-201ENST00000364879 114 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU6-972P-201ENST00000391208 107 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU6-994P-201ENST00000410507 111 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU6-887P-201ENST00000410660 100 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU4-83P-201ENST00000410863 133 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 SNRPGP12-201ENST00000449481 213 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 AC020891.4-201ENST00000605745 93 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 U7.3-201ENST00000616123 62 ntBASIC1.62□□□□□ -2.15
SNAP47Q5SQN1 RNU4-58P-201ENST00000363192 141 ntBASIC1.61□□□□□ -2.15
SNAP47Q5SQN1 SNORA25-201ENST00000384384 134 ntBASIC1.61□□□□□ -2.15
SNAP47Q5SQN1 RPS26P5-201ENST00000418544 335 ntBASIC1.61□□□□□ -2.15
SNAP47Q5SQN1 BTF3P4-201ENST00000418852 495 ntBASIC1.61□□□□□ -2.15
SNAP47Q5SQN1 RNU6-531P-201ENST00000516694 104 ntBASIC1.61□□□□□ -2.15
SNAP47Q5SQN1 AC006254.2-201ENST00000603259 279 ntBASIC1.61□□□□□ -2.15
SNAP47Q5SQN1 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
SNAP47Q5SQN1 RNY1P7-201ENST00000384743 110 ntBASIC1.6□□□□□ -2.15
SNAP47Q5SQN1 MIR125B2-201ENST00000385128 89 ntBASIC1.6□□□□□ -2.15
SNAP47Q5SQN1 RNU6-162P-201ENST00000516228 103 ntBASIC1.6□□□□□ -2.15
SNAP47Q5SQN1 MIR4781-201ENST00000585250 76 ntBASIC1.6□□□□□ -2.15
SNAP47Q5SQN1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.6□□□□□ -2.15
SNAP47Q5SQN1 RNU6-571P-201ENST00000384128 107 ntBASIC1.59□□□□□ -2.15
SNAP47Q5SQN1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SNAP47Q5SQN1 AC002429.1-201ENST00000437672 148 ntBASIC1.59□□□□□ -2.15
SNAP47Q5SQN1 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
SNAP47Q5SQN1 AC103810.7-201ENST00000607821 91 ntBASIC1.59□□□□□ -2.15
SNAP47Q5SQN1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SNAP47Q5SQN1 BX276092.1-201ENST00000427368 251 ntBASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 MIR4676-201ENST00000583078 72 ntBASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 MIR6082-201ENST00000613604 109 ntBASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 MIR8066-201ENST00000617280 78 ntBASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNAP47Q5SQN1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 RNU6-369P-201ENST00000362515 102 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 SNORD26-201ENST00000384147 75 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 RNU6-844P-201ENST00000517175 102 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 MIR4498-201ENST00000577599 66 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 AC027335.2-201ENST00000624030 375 ntBASIC1.57□□□□□ -2.16
SNAP47Q5SQN1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.56□□□□□ -2.16
SNAP47Q5SQN1 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
SNAP47Q5SQN1 RNU6-294P-201ENST00000364999 102 ntBASIC1.56□□□□□ -2.16
SNAP47Q5SQN1 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms