Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
USP46P62068 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
USP46P62068 RNU6-411P-201ENST00000384451 107 ntBASIC2.5□□□□□ -2.01
USP46P62068 MIR144-201ENST00000384886 86 ntBASIC2.5□□□□□ -2.01
USP46P62068 RNU6-523P-201ENST00000516304 54 ntBASIC2.5□□□□□ -2.01
USP46P62068 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.5□□□□□ -2.01
USP46P62068 MIR4713-201ENST00000582691 75 ntBASIC2.5□□□□□ -2.01
USP46P62068 AC013244.2-201ENST00000603396 103 ntBASIC2.5□□□□□ -2.01
USP46P62068 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
USP46P62068 RNU6-208P-201ENST00000362431 107 ntBASIC2.49□□□□□ -2.01
USP46P62068 Y_RNA.536-201ENST00000384621 113 ntBASIC2.49□□□□□ -2.01
USP46P62068 RNU7-195P-201ENST00000458793 62 ntBASIC2.49□□□□□ -2.01
USP46P62068 RNU6-1194P-201ENST00000516208 104 ntBASIC2.49□□□□□ -2.01
USP46P62068 RNU6-807P-201ENST00000516805 107 ntBASIC2.49□□□□□ -2.01
USP46P62068 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.49□□□□□ -2.01
USP46P62068 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP46P62068 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP46P62068 U8.13-201ENST00000390842 128 ntBASIC2.48□□□□□ -2.01
USP46P62068 MIR1257-201ENST00000408490 117 ntBASIC2.48□□□□□ -2.01
USP46P62068 TRAJ51-201ENST00000504127 63 ntBASIC2.48□□□□□ -2.01
USP46P62068 AC104984.5-201ENST00000586878 94 ntBASIC2.48□□□□□ -2.01
USP46P62068 MIR6715A-201ENST00000615929 79 ntBASIC2.48□□□□□ -2.01
USP46P62068 ZNF658B-202ENST00000615961 3375 ntBASIC2.48□□□□□ -2.01
USP46P62068 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USP46P62068 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
USP46P62068 Y_RNA.264-201ENST00000364665 102 ntBASIC2.47□□□□□ -2.01
USP46P62068 RNU6-580P-201ENST00000365159 107 ntBASIC2.47□□□□□ -2.01
USP46P62068 MIR518E-201ENST00000385252 88 ntBASIC2.47□□□□□ -2.01
USP46P62068 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
USP46P62068 snoU13.9-201ENST00000458927 103 ntBASIC2.47□□□□□ -2.01
USP46P62068 snoU13.21-201ENST00000459368 105 ntBASIC2.47□□□□□ -2.01
USP46P62068 MIR548H5-201ENST00000580314 60 ntBASIC2.47□□□□□ -2.01
USP46P62068 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.47□□□□□ -2.01
USP46P62068 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USP46P62068 Y_RNA.532-201ENST00000384590 113 ntBASIC2.46□□□□□ -2.02
USP46P62068 SNORD90-201ENST00000391145 111 ntBASIC2.46□□□□□ -2.02
USP46P62068 RNU7-185P-201ENST00000459215 60 ntBASIC2.46□□□□□ -2.02
USP46P62068 RNU6-448P-201ENST00000517052 107 ntBASIC2.46□□□□□ -2.02
USP46P62068 RNU7-10P-201ENST00000607194 63 ntBASIC2.46□□□□□ -2.02
USP46P62068 MIR6895-201ENST00000613497 78 ntBASIC2.46□□□□□ -2.02
USP46P62068 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USP46P62068 Y_RNA.13-201ENST00000362403 112 ntBASIC2.45□□□□□ -2.02
USP46P62068 SNORA67.3-201ENST00000384366 140 ntBASIC2.45□□□□□ -2.02
USP46P62068 MIR1261-201ENST00000408659 82 ntBASIC2.45□□□□□ -2.02
USP46P62068 SNORD83.1-201ENST00000411362 77 ntBASIC2.45□□□□□ -2.02
USP46P62068 RNU6-70P-201ENST00000516438 60 ntBASIC2.45□□□□□ -2.02
USP46P62068 MIR4299-201ENST00000577899 72 ntBASIC2.45□□□□□ -2.02
USP46P62068 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USP46P62068 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USP46P62068 Y_RNA.330-201ENST00000365230 109 ntBASIC2.44□□□□□ -2.02
USP46P62068 SNORA70B-201ENST00000384210 135 ntBASIC2.44□□□□□ -2.02
USP46P62068 Y_RNA.809-201ENST00000516058 95 ntBASIC2.44□□□□□ -2.02
USP46P62068 RNU6-871P-201ENST00000516122 100 ntBASIC2.44□□□□□ -2.02
USP46P62068 MIR3937-201ENST00000580135 106 ntBASIC2.44□□□□□ -2.02
USP46P62068 AC080100.1-201ENST00000624239 5356 ntBASIC2.43□□□□□ -2.02
USP46P62068 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP46P62068 SNORA40.18-201ENST00000391200 128 ntBASIC2.43□□□□□ -2.02
USP46P62068 RN7SKP223-201ENST00000410582 62 ntBASIC2.43□□□□□ -2.02
USP46P62068 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.43□□□□□ -2.02
USP46P62068 AC079140.2-201ENST00000506193 142 ntBASIC2.43□□□□□ -2.02
USP46P62068 Y_RNA.681-201ENST00000516445 113 ntBASIC2.43□□□□□ -2.02
USP46P62068 MIR1297-201ENST00000637311 77 ntBASIC2.43□□□□□ -2.02
USP46P62068 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP46P62068 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP46P62068 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
USP46P62068 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP46P62068 SNORD1A-201ENST00000364968 72 ntBASIC2.42□□□□□ -2.02
USP46P62068 RNU6-1015P-201ENST00000517121 99 ntBASIC2.42□□□□□ -2.02
USP46P62068 MIR5007-201ENST00000583098 95 ntBASIC2.42□□□□□ -2.02
USP46P62068 MIR6082-201ENST00000613604 109 ntBASIC2.42□□□□□ -2.02
USP46P62068 TRDV1-202ENST00000621643 102 ntBASIC2.42□□□□□ -2.02
USP46P62068 Y_RNA.12-201ENST00000362393 112 ntBASIC2.41□□□□□ -2.02
USP46P62068 U8.2-201ENST00000363156 134 ntBASIC2.41□□□□□ -2.02
USP46P62068 RNU6-1065P-201ENST00000384513 106 ntBASIC2.41□□□□□ -2.02
USP46P62068 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.41□□□□□ -2.02
USP46P62068 AL606490.4-201ENST00000423117 127 ntBASIC2.41□□□□□ -2.02
USP46P62068 AC092628.1-201ENST00000436250 252 ntBASIC2.41□□□□□ -2.02
USP46P62068 MIR3664-201ENST00000579074 99 ntBASIC2.41□□□□□ -2.02
USP46P62068 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USP46P62068 Y_RNA.56-201ENST00000362798 112 ntBASIC2.4□□□□□ -2.03
USP46P62068 Y_RNA.239-201ENST00000364444 113 ntBASIC2.4□□□□□ -2.03
USP46P62068 RNA5SP425-201ENST00000410336 112 ntBASIC2.4□□□□□ -2.03
USP46P62068 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
USP46P62068 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
USP46P62068 Y_RNA.697-201ENST00000516776 113 ntBASIC2.4□□□□□ -2.03
USP46P62068 RNU6-303P-201ENST00000517091 106 ntBASIC2.4□□□□□ -2.03
USP46P62068 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.4□□□□□ -2.03
USP46P62068 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USP46P62068 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.03
USP46P62068 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
USP46P62068 RNU5F-1-201ENST00000362507 117 ntBASIC2.39□□□□□ -2.03
USP46P62068 RNU6-590P-201ENST00000365039 107 ntBASIC2.39□□□□□ -2.03
USP46P62068 RNU6-934P-201ENST00000365154 107 ntBASIC2.39□□□□□ -2.03
USP46P62068 MIR520H-201ENST00000385126 88 ntBASIC2.39□□□□□ -2.03
USP46P62068 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
USP46P62068 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.39□□□□□ -2.03
USP46P62068 MIR664A-201ENST00000626086 82 ntBASIC2.39□□□□□ -2.03
USP46P62068 MIR302D-201ENST00000362275 68 ntBASIC2.38□□□□□ -2.03
USP46P62068 RNU6-1054P-201ENST00000411293 104 ntBASIC2.38□□□□□ -2.03
USP46P62068 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 328.6 ms