Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR4491-201ENST00000581087 68 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 AC012531.4-201ENST00000616509 177 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.47□□□□□ -2.17
GFRA1P56159 RNA5SP327-201ENST00000362494 101 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 Y_RNA.119-201ENST00000363301 96 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 SNORA72.6-201ENST00000384520 129 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
GFRA1P56159 SNORA67.5-201ENST00000391036 107 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 RNU4-83P-201ENST00000410863 133 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 AL603825.1-201ENST00000438481 80 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 AC067940.1-201ENST00000458411 300 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 MIR4500-201ENST00000579472 76 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 AC090897.1-201ENST00000580909 226 ntBASIC1.47□□□□□ -2.17
GFRA1P56159 RNU4-58P-201ENST00000363192 141 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 RNU6-640P-201ENST00000363693 105 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 Y_RNA.466-201ENST00000384294 113 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 RPS26P5-201ENST00000418544 335 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 RNU7-40P-201ENST00000516397 64 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.46□□□□□ -2.18
GFRA1P56159 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 AC091304.10-201ENST00000641554 121 ntBASIC1.46□□□□□ -2.18
GFRA1P56159 HSBP1P2-201ENST00000299671 229 ntBASIC1.45□□□□□ -2.18
GFRA1P56159 RNU6-60P-201ENST00000364792 103 ntBASIC1.45□□□□□ -2.18
GFRA1P56159 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.45□□□□□ -2.18
GFRA1P56159 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
GFRA1P56159 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
GFRA1P56159 RNU6-1298P-201ENST00000362456 101 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 MIR125B2-201ENST00000385128 89 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 Y_RNA.588-201ENST00000391254 102 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
GFRA1P56159 RNY4P30-201ENST00000410216 95 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 AC108667.1-201ENST00000428618 249 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 AC015818.7-201ENST00000428754 109 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 AC087499.7-201ENST00000441958 109 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 AC109327.2-201ENST00000448339 378 ntBASIC1.44□□□□□ -2.18
GFRA1P56159 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
GFRA1P56159 Y_RNA.567-201ENST00000384736 106 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 RNU7-61P-201ENST00000515897 61 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 SNORA25.16-201ENST00000516741 121 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 Y_RNA.705-201ENST00000516862 110 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 MIR4777-201ENST00000583710 86 ntBASIC1.43□□□□□ -2.18
GFRA1P56159 MIR1-1-201ENST00000362147 71 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 RNU6-1163P-201ENST00000364516 107 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 MIR100-201ENST00000385259 80 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 RNU6-531P-201ENST00000516694 104 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 MIR4676-201ENST00000583078 72 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 MIR548Z-201ENST00000584743 97 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 AC020891.4-201ENST00000605745 93 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 AC027335.2-201ENST00000624030 375 ntBASIC1.42□□□□□ -2.18
GFRA1P56159 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
GFRA1P56159 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
GFRA1P56159 RNA5SP363-201ENST00000365072 115 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 Y_RNA.467-201ENST00000384297 102 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-364P-201ENST00000384387 107 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-813P-201ENST00000384691 107 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-644P-201ENST00000391155 98 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-972P-201ENST00000391208 107 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-1194P-201ENST00000516208 104 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-977P-201ENST00000516411 103 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU7-156P-201ENST00000517214 74 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 RNU6-86P-201ENST00000606534 107 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 MIR6082-201ENST00000613604 109 ntBASIC1.41□□□□□ -2.18
GFRA1P56159 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.41□□□□□ -2.18
GFRA1P56159 Y_RNA.173-201ENST00000363776 113 ntBASIC1.4□□□□□ -2.19
GFRA1P56159 Y_RNA.220-201ENST00000364244 109 ntBASIC1.4□□□□□ -2.19
GFRA1P56159 RNU6-571P-201ENST00000384128 107 ntBASIC1.4□□□□□ -2.19
GFRA1P56159 MIR938-201ENST00000401216 83 ntBASIC1.4□□□□□ -2.19
GFRA1P56159 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
GFRA1P56159 MIR101-2-201ENST00000362195 79 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 Y_RNA.13-201ENST00000362403 112 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 Y_RNA.43-201ENST00000362670 111 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 RNU6-887P-201ENST00000410660 100 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 BX276092.1-201ENST00000427368 251 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 SNRPGP12-201ENST00000449481 213 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 RNU6-765P-201ENST00000516916 99 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 MALAT1.1-201ENST00000618249 95 ntBASIC1.39□□□□□ -2.19
GFRA1P56159 RNU6-1125P-201ENST00000363601 107 ntBASIC1.38□□□□□ -2.19
GFRA1P56159 RNU6-1244P-201ENST00000363614 108 ntBASIC1.38□□□□□ -2.19
GFRA1P56159 Y_RNA.342-201ENST00000365352 113 ntBASIC1.38□□□□□ -2.19
GFRA1P56159 RNU6-480P-201ENST00000384332 107 ntBASIC1.38□□□□□ -2.19
GFRA1P56159 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.38□□□□□ -2.19
GFRA1P56159 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
GFRA1P56159 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
GFRA1P56159 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
GFRA1P56159 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms