Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SNORA22.1-201ENST00000362701 134 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 Y_RNA.370-201ENST00000365589 108 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 Y_RNA.467-201ENST00000384297 102 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 SNORA18-201ENST00000384416 132 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 MIR1255A-201ENST00000408338 113 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 MIR1270-201ENST00000459320 83 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 RNU6-521P-201ENST00000516663 105 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 RNU6-267P-201ENST00000516714 103 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 MIR151B-201ENST00000584249 96 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 MIR4791-201ENST00000607666 84 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 AL512310.12-203ENST00000640543 90 ntBASIC1.2□□□□□ -2.22
HOXC13P31276 Y_RNA.205-201ENST00000364128 113 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 Y_RNA.299-201ENST00000364973 94 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-1319P-201ENST00000390855 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-747P-201ENST00000390928 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 SNORD77B-201ENST00000391112 67 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-241P-201ENST00000391148 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-402P-201ENST00000410678 103 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-177P-201ENST00000411257 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-1054P-201ENST00000411293 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-917P-201ENST00000516294 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-1223P-201ENST00000517124 104 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 MIR3152-201ENST00000579801 74 ntBASIC1.19□□□□□ -2.22
HOXC13P31276 RNU6-833P-201ENST00000363486 107 ntBASIC1.18□□□□□ -2.22
HOXC13P31276 SNORD45B-201ENST00000364617 72 ntBASIC1.18□□□□□ -2.22
HOXC13P31276 RNU6-913P-201ENST00000390913 95 ntBASIC1.18□□□□□ -2.22
HOXC13P31276 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
HOXC13P31276 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
HOXC13P31276 MIR548AR-201ENST00000582191 57 ntBASIC1.18□□□□□ -2.22
HOXC13P31276 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HOXC13P31276 Y_RNA.95-201ENST00000363079 95 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 RNU6-1125P-201ENST00000363601 107 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 SNORA1.2-201ENST00000365189 134 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 RNU6-1276P-201ENST00000365372 104 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 RNU6-1201P-201ENST00000384227 107 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 RNU6-242P-201ENST00000384359 107 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 SNORD41-201ENST00000386967 70 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 SNORA26.6-201ENST00000391256 115 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 AC096949.1-201ENST00000412047 152 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 AC243994.1-201ENST00000618627 109 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 MIR6717-201ENST00000622747 73 ntBASIC1.17□□□□□ -2.22
HOXC13P31276 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXC13P31276 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HOXC13P31276 SNORD115-2-201ENST00000362842 82 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 Y_RNA.247-201ENST00000364500 92 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 SNORD115-20-201ENST00000365099 82 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 SNORD115-35-201ENST00000365122 82 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 RNU6-787P-201ENST00000384032 107 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 SNORD116-22-201ENST00000384430 92 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 RNU6-342P-201ENST00000384521 104 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 MIR526A1-201ENST00000384897 85 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 MIR452-201ENST00000385020 85 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 RNU7-53P-201ENST00000516705 60 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 Y_RNA.705-201ENST00000516862 110 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 MIR376B-201ENST00000614515 100 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 MIR6841-201ENST00000637129 72 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HOXC13P31276 AL442644.1-201ENST00000454390 3105 ntBASIC1.16□□□□□ -2.22
HOXC13P31276 Y_RNA.313-201ENST00000365095 103 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 Y_RNA.437-201ENST00000384113 113 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 RNY1P4-201ENST00000384595 115 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 RNU6-887P-201ENST00000410660 100 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 SNORD123-201ENST00000459473 70 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 AC096720.1-201ENST00000604441 183 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 RNU6-86P-201ENST00000606534 107 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 AL020996.3-201ENST00000606617 222 ntBASIC1.15□□□□□ -2.23
HOXC13P31276 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXC13P31276 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXC13P31276 RNU6-1313P-201ENST00000362622 102 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 Y_RNA.244-201ENST00000364484 109 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 SNORA1.1-201ENST00000364671 133 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 Y_RNA.377-201ENST00000365644 108 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 RNU6-979P-201ENST00000383896 107 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 RNU6-675P-201ENST00000384236 104 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 U8.15-201ENST00000390947 134 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 RNU6-1307P-201ENST00000391012 103 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 RNA5SP261-201ENST00000410536 106 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 AC090844.1-201ENST00000422019 156 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 RNU6-1018P-201ENST00000516577 106 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 MIR5588-201ENST00000581890 63 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 MIR3202-2-201ENST00000635980 79 ntBASIC1.14□□□□□ -2.23
HOXC13P31276 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXC13P31276 Y_RNA.221-201ENST00000364248 96 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 RNU6-219P-201ENST00000364728 107 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 SNORD58A-201ENST00000383875 65 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 319.3 ms