Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RXRBP28702 HSBP1P2-201ENST00000299671 229 ntBASIC2.28□□□□□ -2.04
RXRBP28702 Y_RNA.98-201ENST00000363109 102 ntBASIC2.28□□□□□ -2.04
RXRBP28702 RNA5SP138-201ENST00000365098 114 ntBASIC2.28□□□□□ -2.04
RXRBP28702 RNU6-1237P-201ENST00000384777 107 ntBASIC2.28□□□□□ -2.04
RXRBP28702 MIR520C-201ENST00000385005 87 ntBASIC2.28□□□□□ -2.04
RXRBP28702 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
RXRBP28702 AC055731.1-201ENST00000474387 401 ntBASIC2.28□□□□□ -2.04
RXRBP28702 CYP3A52P-201ENST00000563326 91 ntBASIC2.28□□□□□ -2.04
RXRBP28702 AC140658.3-201ENST00000567603 271 ntBASIC2.28□□□□□ -2.04
RXRBP28702 AP001362.1-201ENST00000625165 124 ntBASIC2.28□□□□□ -2.04
RXRBP28702 RNU6-1229P-201ENST00000364295 107 ntBASIC2.27□□□□□ -2.05
RXRBP28702 MIR519C-201ENST00000385053 87 ntBASIC2.27□□□□□ -2.05
RXRBP28702 MIR653-201ENST00000385279 96 ntBASIC2.27□□□□□ -2.05
RXRBP28702 MIR889-201ENST00000401280 79 ntBASIC2.27□□□□□ -2.05
RXRBP28702 AC141846.1-201ENST00000568348 142 ntBASIC2.27□□□□□ -2.05
RXRBP28702 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
RXRBP28702 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.27□□□□□ -2.05
RXRBP28702 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RXRBP28702 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RXRBP28702 RNU6-360P-201ENST00000390944 104 ntBASIC2.26□□□□□ -2.05
RXRBP28702 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
RXRBP28702 AC244023.1-201ENST00000426884 112 ntBASIC2.26□□□□□ -2.05
RXRBP28702 AC093729.1-201ENST00000513074 128 ntBASIC2.26□□□□□ -2.05
RXRBP28702 RNU1-92P-201ENST00000517017 135 ntBASIC2.26□□□□□ -2.05
RXRBP28702 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
RXRBP28702 AC242498.1-201ENST00000604134 111 ntBASIC2.26□□□□□ -2.05
RXRBP28702 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.26□□□□□ -2.05
RXRBP28702 MIR4251-201ENST00000635819 61 ntBASIC2.26□□□□□ -2.05
RXRBP28702 RNU6-1123P-201ENST00000362347 106 ntBASIC2.25□□□□□ -2.05
RXRBP28702 AL662814.1-201ENST00000617364 121 ntBASIC2.25□□□□□ -2.05
RXRBP28702 ZNF209P-201ENST00000593450 2304 ntBASIC2.25□□□□□ -2.05
RXRBP28702 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.24□□□□□ -2.05
RXRBP28702 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.24□□□□□ -2.05
RXRBP28702 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
RXRBP28702 RNU1-93P-201ENST00000364704 169 ntBASIC2.24□□□□□ -2.05
RXRBP28702 SNORD38B-201ENST00000384690 67 ntBASIC2.24□□□□□ -2.05
RXRBP28702 RNU4-83P-201ENST00000410863 133 ntBASIC2.24□□□□□ -2.05
RXRBP28702 AL161935.2-201ENST00000414627 60 ntBASIC2.24□□□□□ -2.05
RXRBP28702 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
RXRBP28702 RNU7-153P-201ENST00000516455 62 ntBASIC2.24□□□□□ -2.05
RXRBP28702 MTND5P40-201ENST00000559945 246 ntBASIC2.24□□□□□ -2.05
RXRBP28702 SNORD38B-202ENST00000625943 69 ntBASIC2.24□□□□□ -2.05
RXRBP28702 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RXRBP28702 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RXRBP28702 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
RXRBP28702 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.23□□□□□ -2.05
RXRBP28702 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RXRBP28702 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
RXRBP28702 SNORD38.2-201ENST00000384470 69 ntBASIC2.23□□□□□ -2.05
RXRBP28702 MIR520E-201ENST00000384867 87 ntBASIC2.23□□□□□ -2.05
RXRBP28702 MIR1302-7-201ENST00000408841 72 ntBASIC2.23□□□□□ -2.05
RXRBP28702 AL353770.2-201ENST00000620024 78 ntBASIC2.23□□□□□ -2.05
RXRBP28702 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.23□□□□□ -2.05
RXRBP28702 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RXRBP28702 RNY1P2-201ENST00000364820 117 ntBASIC2.22□□□□□ -2.05
RXRBP28702 RNU6-949P-201ENST00000384040 107 ntBASIC2.22□□□□□ -2.05
RXRBP28702 RNU6-480P-201ENST00000384332 107 ntBASIC2.22□□□□□ -2.05
RXRBP28702 AC073261.1-201ENST00000429409 121 ntBASIC2.22□□□□□ -2.05
RXRBP28702 RPS29P1-201ENST00000465274 159 ntBASIC2.22□□□□□ -2.05
RXRBP28702 MIR3935-201ENST00000583472 104 ntBASIC2.22□□□□□ -2.05
RXRBP28702 PRELID3BP2-201ENST00000605362 201 ntBASIC2.22□□□□□ -2.05
RXRBP28702 SNORD41-201ENST00000386967 70 ntBASIC2.21□□□□□ -2.06
RXRBP28702 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RXRBP28702 SNORA67.6-201ENST00000391093 99 ntBASIC2.21□□□□□ -2.06
RXRBP28702 SNRPGP12-201ENST00000449481 213 ntBASIC2.21□□□□□ -2.06
RXRBP28702 SNORD4B-201ENST00000459083 72 ntBASIC2.21□□□□□ -2.06
RXRBP28702 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.21□□□□□ -2.06
RXRBP28702 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.21□□□□□ -2.06
RXRBP28702 RNU6-478P-201ENST00000363904 110 ntBASIC2.2□□□□□ -2.06
RXRBP28702 MIR563-201ENST00000385080 79 ntBASIC2.2□□□□□ -2.06
RXRBP28702 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.2□□□□□ -2.06
RXRBP28702 RNU7-85P-201ENST00000458851 63 ntBASIC2.2□□□□□ -2.06
RXRBP28702 snoU13.2-201ENST00000459201 104 ntBASIC2.2□□□□□ -2.06
RXRBP28702 AC138749.4-201ENST00000563970 127 ntBASIC2.2□□□□□ -2.06
RXRBP28702 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.2□□□□□ -2.06
RXRBP28702 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
RXRBP28702 AC090897.1-201ENST00000580909 226 ntBASIC2.2□□□□□ -2.06
RXRBP28702 MIR3192-201ENST00000584920 77 ntBASIC2.2□□□□□ -2.06
RXRBP28702 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RXRBP28702 AP000648.3-201ENST00000623539 4507 ntBASIC2.19□□□□□ -2.06
RXRBP28702 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RXRBP28702 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
RXRBP28702 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
RXRBP28702 RNU6-519P-201ENST00000410590 108 ntBASIC2.19□□□□□ -2.06
RXRBP28702 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.19□□□□□ -2.06
RXRBP28702 MIR151B-201ENST00000584249 96 ntBASIC2.19□□□□□ -2.06
RXRBP28702 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.19□□□□□ -2.06
RXRBP28702 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.18□□□□□ -2.06
RXRBP28702 snoU13.25-201ENST00000458945 104 ntBASIC2.18□□□□□ -2.06
RXRBP28702 AC005908.1-201ENST00000468701 347 ntBASIC2.18□□□□□ -2.06
RXRBP28702 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
RXRBP28702 SNORA25.13-201ENST00000516395 103 ntBASIC2.18□□□□□ -2.06
RXRBP28702 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
RXRBP28702 AC133485.1-201ENST00000567176 124 ntBASIC2.18□□□□□ -2.06
RXRBP28702 MIR6788-201ENST00000618842 66 ntBASIC2.18□□□□□ -2.06
RXRBP28702 RNU6-624P-201ENST00000363411 107 ntBASIC2.17□□□□□ -2.06
RXRBP28702 SNORA16.1-201ENST00000364597 132 ntBASIC2.17□□□□□ -2.06
RXRBP28702 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RXRBP28702 RNA5SP237-201ENST00000410414 113 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms