Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU4-90P-201ENST00000362773 141 ntBASIC-1.72□□□□□ -2.68
CXCL1P09341 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.72□□□□□ -2.68
CXCL1P09341 MIR624-201ENST00000385217 97 ntBASIC-1.72□□□□□ -2.68
CXCL1P09341 MT-TT-201ENST00000387460 66 ntBASIC-1.72□□□□□ -2.68
CXCL1P09341 AL606845.1-201ENST00000404881 255 ntBASIC-1.72□□□□□ -2.68
CXCL1P09341 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.72□□□□□ -2.68
CXCL1P09341 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.73□□□□□ -2.69
CXCL1P09341 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.73□□□□□ -2.69
CXCL1P09341 MIR616-201ENST00000385293 97 ntBASIC-1.73□□□□□ -2.69
CXCL1P09341 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
CXCL1P09341 RNU6-699P-201ENST00000517081 110 ntBASIC-1.73□□□□□ -2.69
CXCL1P09341 snoU18.1-201ENST00000629629 71 ntBASIC-1.73□□□□□ -2.69
CXCL1P09341 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.74□□□□□ -2.69
CXCL1P09341 SNORA79-201ENST00000408376 140 ntBASIC-1.74□□□□□ -2.69
CXCL1P09341 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.74□□□□□ -2.69
CXCL1P09341 RNU6-850P-201ENST00000516934 103 ntBASIC-1.74□□□□□ -2.69
CXCL1P09341 AC022079.1-201ENST00000621546 602 ntBASIC-1.74□□□□□ -2.69
CXCL1P09341 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 RNU6-728P-201ENST00000365375 104 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 RNU6-905P-201ENST00000384434 107 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 RNU6-102P-201ENST00000384485 104 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 RNU4-69P-201ENST00000410677 143 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 RNU6-130P-201ENST00000411112 103 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 RNU6-592P-201ENST00000411333 103 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 HAR1A.1-201ENST00000459583 118 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 MIR548O2-201ENST00000616090 70 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 TRDV1-202ENST00000621643 102 ntBASIC-1.75□□□□□ -2.69
CXCL1P09341 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 RNU6-662P-201ENST00000384253 104 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 MIR516A2-201ENST00000384888 90 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 MIR516A1-201ENST00000385033 90 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 MIR548E-201ENST00000408287 88 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 RNU6-588P-201ENST00000410281 105 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 RNU4-43P-201ENST00000410628 137 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.76□□□□□ -2.69
CXCL1P09341 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.76□□□□□ -2.69
CXCL1P09341 SNORD18.2-201ENST00000459604 70 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 AL442663.2-201ENST00000554385 511 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 RNU2-4P-201ENST00000606190 192 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 AC087741.2-201ENST00000619415 172 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 MIR3974-201ENST00000637126 96 ntBASIC-1.76□□□□□ -2.69
CXCL1P09341 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 MIR582-201ENST00000365731 98 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 RNA5SP266-201ENST00000410273 108 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 RNU7-2P-201ENST00000516096 62 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 SNORD116.3-201ENST00000517176 78 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.77□□□□□ -2.69
CXCL1P09341 AC138207.3-201ENST00000585289 166 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 snoR1.1-201ENST00000628177 80 ntBASIC-1.77□□□□□ -2.69
CXCL1P09341 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.78□□□□□ -2.69
CXCL1P09341 RNU2-35P-201ENST00000516446 142 ntBASIC-1.78□□□□□ -2.69
CXCL1P09341 SNORD116-25-201ENST00000516517 92 ntBASIC-1.78□□□□□ -2.69
CXCL1P09341 SNORA20.3-201ENST00000516880 132 ntBASIC-1.78□□□□□ -2.69
CXCL1P09341 MIR376B-201ENST00000614515 100 ntBASIC-1.78□□□□□ -2.69
CXCL1P09341 U6.100-201ENST00000636230 99 ntBASIC-1.78□□□□□ -2.69
CXCL1P09341 RNU6-845P-201ENST00000362578 103 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 SNORD114-4-201ENST00000363962 75 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 RNU6-326P-201ENST00000365480 107 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 AC025253.1-201ENST00000613623 543 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 AC078883.4-201ENST00000623218 367 ntBASIC-1.79□□□□□ -2.7
CXCL1P09341 SNORA25.1-201ENST00000362326 128 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 RNU6-978P-201ENST00000364371 103 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 SNORD115-23-201ENST00000364461 82 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 SNORD77B-201ENST00000391112 67 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 RNU6-453P-201ENST00000516819 85 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 RNU7-30P-201ENST00000516835 62 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 MIR376A1-201ENST00000616574 68 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.8□□□□□ -2.7
CXCL1P09341 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 RNU6-211P-201ENST00000384047 107 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 SNORD115-46-201ENST00000390982 71 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 MTND4P17-201ENST00000470444 350 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 AL606534.2-204ENST00000635008 178 ntBASIC-1.81□□□□□ -2.7
CXCL1P09341 UBE2WP1-201ENST00000362030 340 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 RNU6-290P-201ENST00000365212 101 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 MTATP6P19-201ENST00000413797 659 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 AC037487.3-201ENST00000606668 112 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 302.2 ms