Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR3658-201ENST00000636291 56 ntBASIC0.01□□□□□ -2.41
VIMP08670 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
VIMP08670 RNY1P11-201ENST00000363759 113 ntBASIC0□□□□□ -2.41
VIMP08670 Y_RNA.299-201ENST00000364973 94 ntBASIC0□□□□□ -2.41
VIMP08670 SNORD18B-201ENST00000365659 72 ntBASIC0□□□□□ -2.41
VIMP08670 RNU6-429P-201ENST00000384582 108 ntBASIC0□□□□□ -2.41
VIMP08670 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
VIMP08670 SNORD37.2-201ENST00000391075 66 ntBASIC0□□□□□ -2.41
VIMP08670 Y_RNA.651-201ENST00000459380 103 ntBASIC0□□□□□ -2.41
VIMP08670 AC138869.1-201ENST00000568623 124 ntBASIC0□□□□□ -2.41
VIMP08670 MIR548H5-201ENST00000580314 60 ntBASIC0□□□□□ -2.41
VIMP08670 AC022709.1-201ENST00000615967 87 ntBASIC0□□□□□ -2.41
VIMP08670 RNU4-84P-201ENST00000364200 139 ntBASIC-0.01□□□□□ -2.41
VIMP08670 RNU6-726P-201ENST00000364680 107 ntBASIC-0.01□□□□□ -2.41
VIMP08670 RNA5SP128-201ENST00000365305 116 ntBASIC-0.01□□□□□ -2.41
VIMP08670 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.01□□□□□ -2.41
VIMP08670 SNORA2A-201ENST00000383885 135 ntBASIC-0.01□□□□□ -2.41
VIMP08670 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.01□□□□□ -2.41
VIMP08670 AC023932.2-201ENST00000603176 175 ntBASIC-0.01□□□□□ -2.41
VIMP08670 RNU6-309P-201ENST00000364573 106 ntBASIC-0.02□□□□□ -2.41
VIMP08670 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.02□□□□□ -2.41
VIMP08670 RNU6-463P-201ENST00000384340 107 ntBASIC-0.02□□□□□ -2.41
VIMP08670 MIR643-201ENST00000385267 97 ntBASIC-0.02□□□□□ -2.41
VIMP08670 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.02□□□□□ -2.41
VIMP08670 MIR548L-201ENST00000408303 86 ntBASIC-0.02□□□□□ -2.41
VIMP08670 AC108059.2-201ENST00000434626 151 ntBASIC-0.02□□□□□ -2.41
VIMP08670 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.02□□□□□ -2.41
VIMP08670 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.02□□□□□ -2.41
VIMP08670 RNU7-121P-201ENST00000516604 62 ntBASIC-0.02□□□□□ -2.41
VIMP08670 RNU7-161P-201ENST00000517289 62 ntBASIC-0.02□□□□□ -2.41
VIMP08670 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
VIMP08670 AC072026.1-201ENST00000605023 201 ntBASIC-0.02□□□□□ -2.41
VIMP08670 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
VIMP08670 MIR6515-201ENST00000619843 57 ntBASIC-0.02□□□□□ -2.41
VIMP08670 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.02□□□□□ -2.41
VIMP08670 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.03□□□□□ -2.41
VIMP08670 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.03□□□□□ -2.41
VIMP08670 MIR206-201ENST00000384872 86 ntBASIC-0.03□□□□□ -2.41
VIMP08670 RPL39P34-201ENST00000477141 156 ntBASIC-0.03□□□□□ -2.41
VIMP08670 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.03□□□□□ -2.41
VIMP08670 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.03□□□□□ -2.41
VIMP08670 MIR4500-201ENST00000579472 76 ntBASIC-0.03□□□□□ -2.41
VIMP08670 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.03□□□□□ -2.41
VIMP08670 MIR499B-201ENST00000636498 73 ntBASIC-0.03□□□□□ -2.41
VIMP08670 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
VIMP08670 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.04□□□□□ -2.42
VIMP08670 RNU4-67P-201ENST00000364569 141 ntBASIC-0.04□□□□□ -2.42
VIMP08670 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.04□□□□□ -2.42
VIMP08670 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.04□□□□□ -2.42
VIMP08670 MIR598-201ENST00000384868 97 ntBASIC-0.04□□□□□ -2.42
VIMP08670 RNU7-48P-201ENST00000458875 63 ntBASIC-0.04□□□□□ -2.42
VIMP08670 RNU7-104P-201ENST00000459398 79 ntBASIC-0.04□□□□□ -2.42
VIMP08670 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.04□□□□□ -2.42
VIMP08670 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.04□□□□□ -2.42
VIMP08670 MIR4719-201ENST00000585233 84 ntBASIC-0.04□□□□□ -2.42
VIMP08670 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.05□□□□□ -2.42
VIMP08670 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.05□□□□□ -2.42
VIMP08670 MIR610-201ENST00000385139 96 ntBASIC-0.05□□□□□ -2.42
VIMP08670 SNORD77B-201ENST00000391112 67 ntBASIC-0.05□□□□□ -2.42
VIMP08670 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.05□□□□□ -2.42
VIMP08670 RNA5SP436-201ENST00000516020 115 ntBASIC-0.05□□□□□ -2.42
VIMP08670 AP002392.1-201ENST00000537692 208 ntBASIC-0.05□□□□□ -2.42
VIMP08670 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
VIMP08670 MIR4514-201ENST00000581410 57 ntBASIC-0.05□□□□□ -2.42
VIMP08670 RNU7-10P-201ENST00000607194 63 ntBASIC-0.05□□□□□ -2.42
VIMP08670 RNA5SP325-201ENST00000363756 130 ntBASIC-0.06□□□□□ -2.42
VIMP08670 MIR635-201ENST00000384830 98 ntBASIC-0.06□□□□□ -2.42
VIMP08670 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
VIMP08670 AL603914.1-201ENST00000401964 204 ntBASIC-0.06□□□□□ -2.42
VIMP08670 AL162376.1-201ENST00000624117 175 ntBASIC-0.06□□□□□ -2.42
VIMP08670 AC099654.10-201ENST00000640395 161 ntBASIC-0.06□□□□□ -2.42
VIMP08670 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.07□□□□□ -2.42
VIMP08670 RNA5SP403-201ENST00000363598 108 ntBASIC-0.07□□□□□ -2.42
VIMP08670 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.07□□□□□ -2.42
VIMP08670 snoU13.18-201ENST00000459483 104 ntBASIC-0.07□□□□□ -2.42
VIMP08670 TRAJ51-201ENST00000504127 63 ntBASIC-0.07□□□□□ -2.42
VIMP08670 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.07□□□□□ -2.42
VIMP08670 AC141273.2-201ENST00000618989 130 ntBASIC-0.07□□□□□ -2.42
VIMP08670 AC067863.3-201ENST00000624172 122 ntBASIC-0.07□□□□□ -2.42
VIMP08670 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
VIMP08670 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.08□□□□□ -2.42
VIMP08670 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.08□□□□□ -2.42
VIMP08670 MIR593-201ENST00000384856 100 ntBASIC-0.08□□□□□ -2.42
VIMP08670 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.08□□□□□ -2.42
VIMP08670 BX276092.1-201ENST00000427368 251 ntBASIC-0.08□□□□□ -2.42
VIMP08670 RNY4P20-201ENST00000516678 93 ntBASIC-0.08□□□□□ -2.42
VIMP08670 AC108081.1-201ENST00000604358 221 ntBASIC-0.08□□□□□ -2.42
VIMP08670 AL137067.1-201ENST00000615933 120 ntBASIC-0.08□□□□□ -2.42
VIMP08670 MIR6718-201ENST00000616153 80 ntBASIC-0.08□□□□□ -2.42
VIMP08670 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.09□□□□□ -2.42
VIMP08670 RNU6-449P-201ENST00000383914 107 ntBASIC-0.09□□□□□ -2.42
VIMP08670 MIR599-201ENST00000385069 95 ntBASIC-0.09□□□□□ -2.42
VIMP08670 RNU7-2P-201ENST00000516096 62 ntBASIC-0.09□□□□□ -2.42
VIMP08670 SNORA70.25-201ENST00000612741 95 ntBASIC-0.09□□□□□ -2.42
VIMP08670 SNORD114-26-201ENST00000363543 72 ntBASIC-0.1□□□□□ -2.43
VIMP08670 RNU6-616P-201ENST00000384353 107 ntBASIC-0.1□□□□□ -2.43
VIMP08670 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
VIMP08670 RNU6-861P-201ENST00000516745 106 ntBASIC-0.1□□□□□ -2.43
VIMP08670 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
VIMP08670 AP001362.1-201ENST00000625165 124 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 248.3 ms