Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR6828-201ENST00000636181 60 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.29-201ENST00000362570 113 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNA5SP117-201ENST00000365294 118 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-1130P-201ENST00000365434 107 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA32-201ENST00000384072 121 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-1104P-201ENST00000384723 104 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 IGKV1-22-201ENST00000524313 326 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC138749.4-201ENST00000563970 127 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.580-201ENST00000391004 95 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-1307P-201ENST00000391012 103 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA40.8-201ENST00000411034 126 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.662-201ENST00000516028 97 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-531P-201ENST00000516694 104 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA25.18-201ENST00000607153 114 ntBASIC0.26□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.298-201ENST00000364960 107 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 MT-TI-201ENST00000387365 69 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.584-201ENST00000391090 114 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU7-164P-201ENST00000459221 62 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNA5SP47-201ENST00000517230 109 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC112693.2-201ENST00000556538 232 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC138907.4-201ENST00000570107 226 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 MIR3121-201ENST00000579680 77 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC021443.1-201ENST00000604478 211 ntBASIC0.25□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORD114-10-201ENST00000363409 72 ntBASIC0.24□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORD28-201ENST00000384706 75 ntBASIC0.24□□□□□ -2.37
TMX2-CTNND1H3BSU7 MTATP6P21-201ENST00000440681 189 ntBASIC0.24□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.24□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.24□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNA5SP133-201ENST00000363368 119 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU4-67P-201ENST00000364569 141 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU4-11P-201ENST00000365287 132 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU4-69P-201ENST00000410677 143 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA25.12-201ENST00000516202 82 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 MIR7107-201ENST00000611489 80 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 AC105081.1-201ENST00000617727 106 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 FTX_2.1-201ENST00000618816 94 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.778-201ENST00000620203 90 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 U6.109-201ENST00000636749 87 ntBASIC0.23□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA63.5-201ENST00000363548 123 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNY1P2-201ENST00000364820 117 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNORA72.6-201ENST00000384520 129 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-535P-201ENST00000384722 107 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-1321P-201ENST00000390905 107 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-460P-201ENST00000391158 108 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNA5SP268-201ENST00000516828 124 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU1-29P-201ENST00000606574 126 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
TMX2-CTNND1H3BSU7 RNU6-151P-201ENST00000364158 107 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-804P-201ENST00000384286 107 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-886P-201ENST00000384319 105 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 SNORD37.2-201ENST00000391075 66 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 AC108059.2-201ENST00000434626 151 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 RPL39P25-201ENST00000449384 154 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNY4P20-201ENST00000516678 93 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 MIR3144-201ENST00000579460 79 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 AL137067.1-201ENST00000615933 120 ntBASIC0.21□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 MIR206-201ENST00000384872 86 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 SUMO1P3-201ENST00000439961 304 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 AC069271.1-201ENST00000445577 156 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 MIR4639-201ENST00000584938 69 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 AC087741.2-201ENST00000619415 172 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 AC244669.1-204ENST00000621564 178 ntBASIC0.2□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU4-58P-201ENST00000363192 141 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-449P-201ENST00000383914 107 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 Y_RNA.398-201ENST00000383952 99 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 AC244505.6-201ENST00000452829 130 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 MTND5P41-201ENST00000517498 206 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 AC098479.1-201ENST00000609225 154 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 AP001340.1-201ENST00000624405 217 ntBASIC0.19□□□□□ -2.38
TMX2-CTNND1H3BSU7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 Y_RNA.150-201ENST00000363562 102 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-915P-201ENST00000364943 103 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 SNORD18B-201ENST00000365659 72 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-187P-201ENST00000384139 106 ntBASIC0.18□□□□□ -2.38
TMX2-CTNND1H3BSU7 RNU6-616P-201ENST00000384353 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms