Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR6082-201ENST00000613604 109 ntBASIC2.56□□□□□ -2
RCCD1A6NED2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RCCD1A6NED2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RCCD1A6NED2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.55□□□□□ -2
RCCD1A6NED2 Y_RNA.207-201ENST00000364142 106 ntBASIC2.55□□□□□ -2
RCCD1A6NED2 RNA5SP126-201ENST00000365092 109 ntBASIC2.55□□□□□ -2
RCCD1A6NED2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RCCD1A6NED2 RNU6-1241P-201ENST00000384536 107 ntBASIC2.55□□□□□ -2
RCCD1A6NED2 MIR154-201ENST00000385243 84 ntBASIC2.55□□□□□ -2
RCCD1A6NED2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.55□□□□□ -2
RCCD1A6NED2 AC092628.1-201ENST00000436250 252 ntBASIC2.55□□□□□ -2
RCCD1A6NED2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.55□□□□□ -2
RCCD1A6NED2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RCCD1A6NED2 MIR942-201ENST00000401111 86 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 SNORA11.2-201ENST00000408318 127 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 MIR1265-201ENST00000408444 86 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 MIR4713-201ENST00000582691 75 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 MIR8063-201ENST00000621930 81 ntBASIC2.54□□□□□ -2
RCCD1A6NED2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RCCD1A6NED2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
RCCD1A6NED2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RCCD1A6NED2 RNU6-664P-201ENST00000362381 107 ntBASIC2.53□□□□□ -2
RCCD1A6NED2 Y_RNA.13-201ENST00000362403 112 ntBASIC2.53□□□□□ -2
RCCD1A6NED2 SNORD101-201ENST00000384027 73 ntBASIC2.53□□□□□ -2
RCCD1A6NED2 RNU6-540P-201ENST00000384622 101 ntBASIC2.53□□□□□ -2
RCCD1A6NED2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.53□□□□□ -2
RCCD1A6NED2 MIR4696-201ENST00000581431 70 ntBASIC2.53□□□□□ -2
RCCD1A6NED2 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.53□□□□□ -2
RCCD1A6NED2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RCCD1A6NED2 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 RNU6-340P-201ENST00000364005 107 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 SNORA67.3-201ENST00000384366 140 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 AL606490.4-201ENST00000423117 127 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 RPL23AP94-201ENST00000512518 302 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 RNU6-765P-201ENST00000516916 99 ntBASIC2.52□□□□□ -2.01
RCCD1A6NED2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RCCD1A6NED2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RCCD1A6NED2 RNU6-681P-201ENST00000364012 104 ntBASIC2.51□□□□□ -2.01
RCCD1A6NED2 Y_RNA.371-201ENST00000365591 113 ntBASIC2.51□□□□□ -2.01
RCCD1A6NED2 Y_RNA.386-201ENST00000383913 105 ntBASIC2.51□□□□□ -2.01
RCCD1A6NED2 AC097635.1-201ENST00000450678 155 ntBASIC2.51□□□□□ -2.01
RCCD1A6NED2 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
RCCD1A6NED2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.5□□□□□ -2.01
RCCD1A6NED2 RNU6-154P-201ENST00000384306 106 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 RNU6-800P-201ENST00000384473 103 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 RNU6-291P-201ENST00000384720 107 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 Y_RNA.697-201ENST00000516776 113 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 MIR3664-201ENST00000579074 99 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
RCCD1A6NED2 MIR1291-201ENST00000627649 87 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 U6.111-201ENST00000636093 83 ntBASIC2.5□□□□□ -2.01
RCCD1A6NED2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
RCCD1A6NED2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.49□□□□□ -2.01
RCCD1A6NED2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.49□□□□□ -2.01
RCCD1A6NED2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RCCD1A6NED2 RNU4-82P-201ENST00000362443 140 ntBASIC2.49□□□□□ -2.01
RCCD1A6NED2 AL513328.1-201ENST00000446460 224 ntBASIC2.49□□□□□ -2.01
RCCD1A6NED2 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
RCCD1A6NED2 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
RCCD1A6NED2 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.49□□□□□ -2.01
RCCD1A6NED2 U6.100-201ENST00000636230 99 ntBASIC2.49□□□□□ -2.01
RCCD1A6NED2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RCCD1A6NED2 MIR449A-201ENST00000362113 91 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 SNORD33-201ENST00000362761 85 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 RNU6-1054P-201ENST00000411293 104 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 SUMO1P4-201ENST00000429430 302 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 snoU13.9-201ENST00000458927 103 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.48□□□□□ -2.01
RCCD1A6NED2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 MIR4287-201ENST00000579398 78 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 MTRNR2L2-201ENST00000604882 87 ntBASIC2.48□□□□□ -2.01
RCCD1A6NED2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RCCD1A6NED2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RCCD1A6NED2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
RCCD1A6NED2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RCCD1A6NED2 RNU6-330P-201ENST00000363015 107 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 RNU6-663P-201ENST00000391105 106 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 SNORD83.1-201ENST00000411362 77 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 snoU13.21-201ENST00000459368 105 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 AC104435.1-201ENST00000483483 166 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 AC138907.6-201ENST00000568401 126 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 AC138869.1-201ENST00000568623 124 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 ZNF209P-201ENST00000593450 2304 ntBASIC2.47□□□□□ -2.01
RCCD1A6NED2 MIR302D-201ENST00000362275 68 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 U8.2-201ENST00000363156 134 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 Y_RNA.205-201ENST00000364128 113 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 SNORA16B-201ENST00000364674 135 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 RNU6-934P-201ENST00000365154 107 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 RNU6-1065P-201ENST00000384513 106 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 Y_RNA.606-201ENST00000410579 103 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 AC079140.2-201ENST00000506193 142 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 MIR3140-201ENST00000583685 90 ntBASIC2.46□□□□□ -2.02
RCCD1A6NED2 SNORD113.3-201ENST00000364630 78 ntBASIC2.45□□□□□ -2.02
RCCD1A6NED2 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
RCCD1A6NED2 SNORD115-31-201ENST00000365318 82 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms