Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.82□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-363P-201ENST00000362895 105 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.328-201ENST00000365208 113 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.362-201ENST00000365518 110 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 MIR548A3-201ENST00000385297 97 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-1307P-201ENST00000391012 103 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 SNORD100-201ENST00000408573 76 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 SNORA25.16-201ENST00000516741 121 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-448P-201ENST00000517052 107 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 AC007012.1-201ENST00000567192 175 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 MIR1255B1-201ENST00000636325 63 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 U6.109-201ENST00000636749 87 ntBASIC0.81□□□□□ -2.28
TCRBV7S3A2A0A539 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 MIR96-201ENST00000362288 78 ntBASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 RNU4-58P-201ENST00000363192 141 ntBASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.119-201ENST00000363301 96 ntBASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-521P-201ENST00000516663 105 ntBASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-834P-201ENST00000362367 110 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 Y_RNA.85-201ENST00000363014 111 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 RNU4-67P-201ENST00000364569 141 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 SNORA72.6-201ENST00000384520 129 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-429P-201ENST00000384582 108 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AL606753.1-201ENST00000427435 87 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AC002350.1-201ENST00000490759 375 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-313P-201ENST00000516317 112 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AP001362.1-201ENST00000625165 124 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 AL162726.3-218ENST00000636401 95 ntBASIC0.79□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-865P-201ENST00000364772 107 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-1154P-201ENST00000391001 104 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 RNU2-51P-201ENST00000410708 197 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-1018P-201ENST00000516577 106 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 RNU6-531P-201ENST00000516694 104 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
TCRBV7S3A2A0A539 RNU4-45P-201ENST00000365469 141 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.507-201ENST00000384500 99 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 MIR548A1-201ENST00000385041 97 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 MIR1912-201ENST00000410389 80 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 AL603825.1-201ENST00000438481 80 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 DEFB131E-201ENST00000532329 154 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 MIR4498-201ENST00000577599 66 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 MIR3612-201ENST00000579753 87 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 MIR376B-201ENST00000614515 100 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 AL035470.1-201ENST00000622571 220 ntBASIC0.77□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.309-201ENST00000365046 111 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.360-201ENST00000365512 102 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1144P-201ENST00000384247 104 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-321P-201ENST00000410912 106 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 AL353813.1-201ENST00000440700 253 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 TRMT112P2-201ENST00000512910 132 ntBASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1313P-201ENST00000362622 102 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.281-201ENST00000364774 94 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-409P-201ENST00000384114 104 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-816P-201ENST00000390914 107 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-679P-201ENST00000391003 106 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1268P-201ENST00000391214 107 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1239P-201ENST00000391310 107 ntBASIC0.75□□□□□ -2.29
TCRBV7S3A2A0A539 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 SNORD116-21-201ENST00000384507 92 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-880P-201ENST00000384526 107 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.549-201ENST00000384657 102 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-291P-201ENST00000384720 107 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-476P-201ENST00000384726 107 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 SNORA19-201ENST00000384737 128 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 MIR34C-201ENST00000384831 77 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 SNORA7.5-201ENST00000410672 110 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.697-201ENST00000516776 113 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 uc_338.16-201ENST00000621804 95 ntBASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
TCRBV7S3A2A0A539 MIR18A-201ENST00000362310 71 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.56-201ENST00000362798 112 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.174-201ENST00000363781 105 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 RNA5SP117-201ENST00000365294 118 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1081P-201ENST00000384537 107 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1064P-201ENST00000410626 104 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-733P-201ENST00000410759 104 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 RNU6-1006P-201ENST00000516998 103 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 MTND5P34-201ENST00000568888 325 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
TCRBV7S3A2A0A539 Y_RNA.155-201ENST00000363632 101 ntBASIC0.72□□□□□ -2.29
TCRBV7S3A2A0A539 AC068339.1-201ENST00000526965 141 ntBASIC0.72□□□□□ -2.29
TCRBV7S3A2A0A539 MIR4500-201ENST00000579472 76 ntBASIC0.72□□□□□ -2.29
TCRBV7S3A2A0A539 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms