Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNU6-768P-201ENST00000384683 107 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 MIR1197-201ENST00000408818 88 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 AC108059.2-201ENST00000434626 151 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 SUMO1P3-201ENST00000439961 304 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 RNU2-35P-201ENST00000516446 142 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 SNORA63-201ENST00000363450 132 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 RNU6-47P-201ENST00000383866 107 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 SNORA2A-201ENST00000383885 135 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 AC073261.1-201ENST00000429409 121 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 RNU6-531P-201ENST00000516694 104 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 RNU7-137P-201ENST00000516788 62 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 RNU6-111P-201ENST00000517179 105 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 AC138749.4-201ENST00000563970 127 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 MIR4639-201ENST00000584938 69 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.07□□□□□ -2.4
CDH9Q9ULB4 SNORA63.5-201ENST00000363548 123 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 SNORA25.7-201ENST00000364375 127 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 SNORA72.6-201ENST00000384520 129 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 RNU6-535P-201ENST00000384722 107 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 SCARNA15.1-201ENST00000516384 125 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 AC244669.1-204ENST00000621564 178 ntBASIC0.06□□□□□ -2.4
CDH9Q9ULB4 RNU6-508P-201ENST00000363231 103 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNU6-702P-201ENST00000364982 107 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNU6-716P-201ENST00000365621 103 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNU4-70P-201ENST00000384579 139 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.556-201ENST00000384677 113 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNA5SP63-201ENST00000391225 112 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 PCNPP3-201ENST00000393579 471 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNU6-1023P-201ENST00000516137 106 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 SNORD67.1-201ENST00000516618 108 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNU6-135P-201ENST00000516769 101 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNU7-70P-201ENST00000516941 66 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 MIR548AE2-201ENST00000583456 67 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 AC062037.2-201ENST00000610137 73 ntBASIC0.05□□□□□ -2.4
CDH9Q9ULB4 RNA5SP133-201ENST00000363368 119 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.357-201ENST00000365487 109 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.497-201ENST00000384447 98 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.531-201ENST00000384589 121 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 RPL39P25-201ENST00000449384 154 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 RNU6-893P-201ENST00000458841 100 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 RNU7-113P-201ENST00000459273 62 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 RNU6-469P-201ENST00000516253 101 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 RNU4-71P-201ENST00000516258 113 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 RNU6-327P-201ENST00000516270 127 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 MIR4752-201ENST00000579672 72 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 MIR4503-201ENST00000582187 83 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 AC091304.10-201ENST00000641554 121 ntBASIC0.04□□□□□ -2.4
CDH9Q9ULB4 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNY1P2-201ENST00000364820 117 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 SNORA32-201ENST00000384072 121 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNU6-1011P-201ENST00000384668 107 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 AC244505.6-201ENST00000452829 130 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 Y_RNA.651-201ENST00000459380 103 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNU6-1219P-201ENST00000516143 112 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNA5SP227-201ENST00000516184 113 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNA5SP33-201ENST00000516687 98 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 U6.109-201ENST00000636749 87 ntBASIC0.03□□□□□ -2.4
CDH9Q9ULB4 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.193-201ENST00000363979 102 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-726P-201ENST00000364680 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.307-201ENST00000365022 117 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.515-201ENST00000384535 112 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-127P-201ENST00000390897 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.793-201ENST00000411222 111 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-848P-201ENST00000515948 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-617P-201ENST00000516147 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-473P-201ENST00000516164 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 RNU7-161P-201ENST00000517289 62 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 AC022559.1-201ENST00000520905 205 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 MIR4305-201ENST00000583252 102 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.02□□□□□ -2.41
CDH9Q9ULB4 AC009779.6-201ENST00000603972 165 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.01□□□□□ -2.41
CDH9Q9ULB4 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
CDH9Q9ULB4 RNU6-161P-201ENST00000363051 106 ntBASIC0.01□□□□□ -2.41
CDH9Q9ULB4 RNU4-58P-201ENST00000363192 141 ntBASIC0.01□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.01□□□□□ -2.41
CDH9Q9ULB4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms