Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC4.04□□□□□ -1.76
RNF216Q9NWF9 AP000553.6-201ENST00000641242 118 ntBASIC4.04□□□□□ -1.76
RNF216Q9NWF9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
RNF216Q9NWF9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RNF216Q9NWF9 RNU6-54P-201ENST00000365563 107 ntBASIC4.03□□□□□ -1.76
RNF216Q9NWF9 AL161935.2-201ENST00000414627 60 ntBASIC4.03□□□□□ -1.76
RNF216Q9NWF9 RNA5SP385-201ENST00000515947 110 ntBASIC4.03□□□□□ -1.76
RNF216Q9NWF9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF216Q9NWF9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
RNF216Q9NWF9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF216Q9NWF9 RNU6-934P-201ENST00000365154 107 ntBASIC4.02□□□□□ -1.77
RNF216Q9NWF9 RNU6-1126P-201ENST00000384002 107 ntBASIC4.02□□□□□ -1.77
RNF216Q9NWF9 SNORD113-2-201ENST00000391082 72 ntBASIC4.02□□□□□ -1.77
RNF216Q9NWF9 AL645939.4-201ENST00000604495 135 ntBASIC4.02□□□□□ -1.77
RNF216Q9NWF9 MIR548O2-201ENST00000616090 70 ntBASIC4.02□□□□□ -1.77
RNF216Q9NWF9 MIR6739-201ENST00000622461 75 ntBASIC4.02□□□□□ -1.77
RNF216Q9NWF9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF216Q9NWF9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF216Q9NWF9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF216Q9NWF9 AC025033.1-201ENST00000463883 194 ntBASIC4.01□□□□□ -1.77
RNF216Q9NWF9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF216Q9NWF9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RNF216Q9NWF9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF216Q9NWF9 U8.2-201ENST00000363156 134 ntBASIC4□□□□□ -1.77
RNF216Q9NWF9 RNA5SP270-201ENST00000411361 118 ntBASIC4□□□□□ -1.77
RNF216Q9NWF9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC4□□□□□ -1.77
RNF216Q9NWF9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF216Q9NWF9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF216Q9NWF9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF216Q9NWF9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF216Q9NWF9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF216Q9NWF9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF216Q9NWF9 RNU6-930P-201ENST00000390938 100 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 RNA5SP293-201ENST00000410527 113 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 AL513328.1-201ENST00000446460 224 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 RN7SL442P-201ENST00000473804 320 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 RNU6-250P-201ENST00000516958 103 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 MIR4771-2-201ENST00000577758 74 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 MIR548AG2-201ENST00000581228 64 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 MIR4771-1-201ENST00000582617 74 ntBASIC3.99□□□□□ -1.77
RNF216Q9NWF9 RNA5SP383-201ENST00000362934 120 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 RNA5SP126-201ENST00000365092 109 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 RNU6-35P-201ENST00000384530 107 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 JTBP1-201ENST00000441314 247 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 MIR4425-201ENST00000580572 84 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 MIR4513-201ENST00000581077 86 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 MIR3922-201ENST00000585192 84 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 AP003355.3-201ENST00000623465 114 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 MIR3651-201ENST00000630427 90 ntBASIC3.98□□□□□ -1.77
RNF216Q9NWF9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF216Q9NWF9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF216Q9NWF9 Z96811.1-201ENST00000445880 108 ntBASIC3.97□□□□□ -1.77
RNF216Q9NWF9 RNU6-980P-201ENST00000516925 103 ntBASIC3.97□□□□□ -1.77
RNF216Q9NWF9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF216Q9NWF9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF216Q9NWF9 AC067940.1-201ENST00000458411 300 ntBASIC3.96□□□□□ -1.78
RNF216Q9NWF9 RNU7-119P-201ENST00000459279 63 ntBASIC3.96□□□□□ -1.78
RNF216Q9NWF9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF216Q9NWF9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF216Q9NWF9 U8.9-201ENST00000365667 134 ntBASIC3.95□□□□□ -1.78
RNF216Q9NWF9 MIR4506-201ENST00000584693 77 ntBASIC3.95□□□□□ -1.78
RNF216Q9NWF9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF216Q9NWF9 AL021368.2-201ENST00000606125 5352 ntBASIC3.95□□□□□ -1.78
RNF216Q9NWF9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF216Q9NWF9 MIR617-201ENST00000385030 97 ntBASIC3.94□□□□□ -1.78
RNF216Q9NWF9 RN7SKP123-201ENST00000410732 291 ntBASIC3.94□□□□□ -1.78
RNF216Q9NWF9 SNORD42B-201ENST00000458893 67 ntBASIC3.94□□□□□ -1.78
RNF216Q9NWF9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF216Q9NWF9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF216Q9NWF9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF216Q9NWF9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF216Q9NWF9 RNU6-364P-201ENST00000384387 107 ntBASIC3.93□□□□□ -1.78
RNF216Q9NWF9 RNU6-1162P-201ENST00000384443 104 ntBASIC3.93□□□□□ -1.78
RNF216Q9NWF9 AL157398.1-201ENST00000452981 186 ntBASIC3.93□□□□□ -1.78
RNF216Q9NWF9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF216Q9NWF9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF216Q9NWF9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF216Q9NWF9 MIR517B-201ENST00000385102 67 ntBASIC3.92□□□□□ -1.78
RNF216Q9NWF9 RNA5SP450-201ENST00000411206 102 ntBASIC3.92□□□□□ -1.78
RNF216Q9NWF9 SNORA31.11-201ENST00000516528 139 ntBASIC3.92□□□□□ -1.78
RNF216Q9NWF9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.92□□□□□ -1.78
RNF216Q9NWF9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF216Q9NWF9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RNF216Q9NWF9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF216Q9NWF9 RNU6-990P-201ENST00000364385 104 ntBASIC3.91□□□□□ -1.78
RNF216Q9NWF9 Y_RNA.330-201ENST00000365230 109 ntBASIC3.91□□□□□ -1.78
RNF216Q9NWF9 RNU6-579P-201ENST00000516879 102 ntBASIC3.91□□□□□ -1.78
RNF216Q9NWF9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF216Q9NWF9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF216Q9NWF9 RNU6-805P-201ENST00000365643 106 ntBASIC3.9□□□□□ -1.79
RNF216Q9NWF9 RNU6V-201ENST00000384105 107 ntBASIC3.9□□□□□ -1.79
RNF216Q9NWF9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF216Q9NWF9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF216Q9NWF9 AL359851.1-201ENST00000569460 4997 ntBASIC3.9□□□□□ -1.79
RNF216Q9NWF9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF216Q9NWF9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF216Q9NWF9 SNORA38.1-201ENST00000364172 131 ntBASIC3.89□□□□□ -1.79
RNF216Q9NWF9 SNORA48.2-201ENST00000390926 124 ntBASIC3.89□□□□□ -1.79
RNF216Q9NWF9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms