Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 MIR424-201ENST00000362227 98 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNU4-32P-201ENST00000363404 141 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 MIR1236-201ENST00000408340 102 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNU4-83P-201ENST00000410863 133 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNA5SP100-201ENST00000410903 110 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNA5SP59-201ENST00000410922 110 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNU7-85P-201ENST00000458851 63 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNA5SP182-201ENST00000516064 82 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RC3H2Q9HBD1 RNA5SP276-201ENST00000362580 94 ntBASIC2.18□□□□□ -2.06
RC3H2Q9HBD1 MIR583-201ENST00000384846 75 ntBASIC2.18□□□□□ -2.06
RC3H2Q9HBD1 SNORA17.3-201ENST00000391159 129 ntBASIC2.18□□□□□ -2.06
RC3H2Q9HBD1 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
RC3H2Q9HBD1 AC141846.1-201ENST00000568348 142 ntBASIC2.18□□□□□ -2.06
RC3H2Q9HBD1 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
RC3H2Q9HBD1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RC3H2Q9HBD1 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
RC3H2Q9HBD1 SNRPGP12-201ENST00000449481 213 ntBASIC2.17□□□□□ -2.06
RC3H2Q9HBD1 MIR4498-201ENST00000577599 66 ntBASIC2.17□□□□□ -2.06
RC3H2Q9HBD1 AC090897.1-201ENST00000580909 226 ntBASIC2.17□□□□□ -2.06
RC3H2Q9HBD1 Y_RNA.338-201ENST00000365320 114 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 RNA5SP247-201ENST00000411181 105 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 SCARNA18B-201ENST00000458806 135 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 RNA5SP445-201ENST00000515889 115 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 SNORA31.17-201ENST00000516953 127 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 AL662814.1-201ENST00000617364 121 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 AP000648.3-201ENST00000623539 4507 ntBASIC2.16□□□□□ -2.06
RC3H2Q9HBD1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
RC3H2Q9HBD1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.15□□□□□ -2.06
RC3H2Q9HBD1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
RC3H2Q9HBD1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
RC3H2Q9HBD1 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 RNU6-1094P-201ENST00000362416 104 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 RNY1P2-201ENST00000364820 117 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 AC005908.1-201ENST00000468701 347 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 RNU6-557P-201ENST00000516842 110 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 MIR3134-201ENST00000579433 74 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 MIR8066-201ENST00000617280 78 ntBASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RC3H2Q9HBD1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 MIRLET7A1-201ENST00000362295 80 ntBASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 MIR520C-201ENST00000385005 87 ntBASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 RNU7-41P-201ENST00000515917 61 ntBASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 AC133485.1-201ENST00000567176 124 ntBASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.14□□□□□ -2.07
RC3H2Q9HBD1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 SNORA63.2-201ENST00000362603 126 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 RNU6-590P-201ENST00000365039 107 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 Y_RNA.532-201ENST00000384590 113 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 SNORD38B-201ENST00000384690 67 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AC108667.1-201ENST00000428618 249 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AC027119.1-201ENST00000440877 241 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AC138749.4-201ENST00000563970 127 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 SNORD38B-202ENST00000625943 69 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 MIR4251-201ENST00000635819 61 ntBASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RC3H2Q9HBD1 WWP1P1-201ENST00000466609 2769 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 RNU6-949P-201ENST00000384040 107 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 snoU13.11-201ENST00000459219 104 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 RNU6-850P-201ENST00000516934 103 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 MIR4796-201ENST00000580742 81 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 AP000753.3-201ENST00000604083 169 ntBASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.12□□□□□ -2.07
RC3H2Q9HBD1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 RNA5SP237-201ENST00000410414 113 ntBASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 AC244023.1-201ENST00000426884 112 ntBASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 Y_RNA.648-201ENST00000459455 110 ntBASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 AC242498.1-201ENST00000604134 111 ntBASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
RC3H2Q9HBD1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 RNU6-686P-201ENST00000364839 107 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 RNA5SP292-201ENST00000390974 118 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 SNORA40.18-201ENST00000391200 128 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 AC003989.2-201ENST00000440224 169 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms