Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 AL353813.1-201ENST00000440700 253 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.21□□□□□ -2.22
CDT1Q9H211 PVT1_3.1-201ENST00000620853 95 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 Y_RNA.213-201ENST00000364178 111 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 RNU6-153P-201ENST00000364422 104 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 RNU6-1107P-201ENST00000364817 104 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 SNORD38B-201ENST00000384690 67 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 RNU6-205P-201ENST00000390858 107 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
CDT1Q9H211 MIR4679-2-201ENST00000578358 77 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 uc_338.28-201ENST00000612082 187 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 MIR6740-201ENST00000618268 113 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 SNORD38B-202ENST00000625943 69 ntBASIC1.2□□□□□ -2.22
CDT1Q9H211 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.2□□□□□ -2.22
CDT1Q9H211 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDT1Q9H211 RNU6-755P-201ENST00000364400 103 ntBASIC1.19□□□□□ -2.22
CDT1Q9H211 U8.6-201ENST00000364939 135 ntBASIC1.19□□□□□ -2.22
CDT1Q9H211 MIR605-201ENST00000385078 83 ntBASIC1.19□□□□□ -2.22
CDT1Q9H211 RNU6-554P-201ENST00000410466 106 ntBASIC1.19□□□□□ -2.22
CDT1Q9H211 RNA5SP261-201ENST00000410536 106 ntBASIC1.19□□□□□ -2.22
CDT1Q9H211 MIR3163-201ENST00000581592 73 ntBASIC1.19□□□□□ -2.22
CDT1Q9H211 MIR450A1-201ENST00000362262 91 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 RNU6-1014P-201ENST00000383940 103 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 RNU6-147P-201ENST00000383983 107 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 SNORA75.2-201ENST00000391138 150 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 SNORA75.3-201ENST00000391231 150 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 SNORA19.1-201ENST00000410656 129 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 snoU13.21-201ENST00000459368 105 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 RNU7-79P-201ENST00000516082 62 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 RNU7-35P-201ENST00000517174 62 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 AC068339.1-201ENST00000526965 141 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 MIR3613-201ENST00000579844 87 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
CDT1Q9H211 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CDT1Q9H211 SNORD115-19-201ENST00000363098 82 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 SNORD115-18-201ENST00000363293 82 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 SNORD115-17-201ENST00000364612 82 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 Y_RNA.330-201ENST00000365230 109 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 MIR588-201ENST00000384900 83 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 MIR759-201ENST00000390224 91 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 RNU6-893P-201ENST00000458841 100 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 snoU13.2-201ENST00000459201 104 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 MIR5009-201ENST00000578736 100 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 AC105081.1-201ENST00000617727 106 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
CDT1Q9H211 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDT1Q9H211 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 Y_RNA.205-201ENST00000364128 113 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNY1P13-201ENST00000365030 105 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNU6-396P-201ENST00000365369 105 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 SNORA80D-201ENST00000384488 135 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNU6-816P-201ENST00000390914 107 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNU6-1268P-201ENST00000391214 107 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNU6-1239P-201ENST00000391310 107 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RPL39P34-201ENST00000477141 156 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 SNORD67.1-201ENST00000516618 108 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 RNU6-94P-201ENST00000607728 107 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 SEPT14P17-201ENST00000617978 177 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 AL162726.3-218ENST00000636401 95 ntBASIC1.16□□□□□ -2.22
CDT1Q9H211 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CDT1Q9H211 MIR30D-201ENST00000362283 70 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 RNU6-363P-201ENST00000362895 105 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 Y_RNA.323-201ENST00000365157 109 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 RNU6-679P-201ENST00000391003 106 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 SNORA7.5-201ENST00000410672 110 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 AC096949.1-201ENST00000412047 152 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 RNU7-21P-201ENST00000459430 62 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 UBL5P1-201ENST00000507979 193 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 RNU6-521P-201ENST00000516663 105 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 AC141846.1-201ENST00000568348 142 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
CDT1Q9H211 Y_RNA.299-201ENST00000364973 94 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 MIR563-201ENST00000385080 79 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CDT1Q9H211 MTATP6P29-201ENST00000415057 132 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 AC015818.7-201ENST00000428754 109 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 AC087499.7-201ENST00000441958 109 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 RPS29P1-201ENST00000465274 159 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 RNU6-109P-201ENST00000516364 107 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 RNU6-184P-201ENST00000516514 107 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
CDT1Q9H211 Y_RNA.247-201ENST00000364500 92 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms