Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 SNORA40-201ENST00000388090 126 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 SNORD89-201ENST00000390981 114 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 AC067940.1-201ENST00000458411 300 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 RNU7-123P-201ENST00000515911 60 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 RNA5SP33-201ENST00000516687 98 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 MIR8087-201ENST00000612745 78 ntBASIC0.83□□□□□ -2.28
RTP3Q9BQQ7 MIR1-1-201ENST00000362147 71 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RNU6-369P-201ENST00000362515 102 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 Y_RNA.298-201ENST00000364960 107 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RNU6-187P-201ENST00000384139 106 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 MIR18B-201ENST00000454574 71 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 RNA5SP121-201ENST00000516537 101 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 MIR4771-2-201ENST00000577758 74 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 MIR4771-1-201ENST00000582617 74 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 AL662814.1-201ENST00000617364 121 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 TUG1_4.1-201ENST00000619464 181 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 AL589743.1-201ENST00000551932 2712 ntBASIC0.82□□□□□ -2.28
RTP3Q9BQQ7 SNORD115-2-201ENST00000362842 82 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 SNORD115-20-201ENST00000365099 82 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 MIR548M-201ENST00000408260 86 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 AL158147.1-201ENST00000443970 75 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 RN7SKP19-201ENST00000516016 252 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 IGKV1-22-201ENST00000524313 326 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 AC020891.4-201ENST00000605745 93 ntBASIC0.81□□□□□ -2.28
RTP3Q9BQQ7 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 RNU6-647P-201ENST00000364243 107 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 SNORA32-201ENST00000384072 121 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 RNY4P20-201ENST00000516678 93 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 AC141846.1-201ENST00000568348 142 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 AC023934.1-201ENST00000574529 2389 ntBASIC0.8□□□□□ -2.28
RTP3Q9BQQ7 RNU6-235P-201ENST00000362644 107 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 RNU6-1104P-201ENST00000384723 104 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 MT-TF-201ENST00000387314 71 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 Y_RNA.586-201ENST00000391146 98 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 RNU6-1086P-201ENST00000410930 100 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 RNU6-1211P-201ENST00000459179 105 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 RNU7-79P-201ENST00000516082 62 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 AC022523.2-201ENST00000561045 150 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 MIR4676-201ENST00000583078 72 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 MIR548AE2-201ENST00000583456 67 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
RTP3Q9BQQ7 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 RNY1P13-201ENST00000365030 105 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 MIR1263-201ENST00000408324 86 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 RPL39P25-201ENST00000449384 154 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 RNU7-185P-201ENST00000459215 60 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 RNU6-977P-201ENST00000516411 103 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 RNA5SP395-201ENST00000516567 118 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 AL136317.1-201ENST00000612653 226 ntBASIC0.78□□□□□ -2.28
RTP3Q9BQQ7 RNU6-704P-201ENST00000364162 103 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 SNORD50.2-201ENST00000365465 70 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 RNU6-716P-201ENST00000365621 103 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 U8.15-201ENST00000390947 134 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 SNORD93-201ENST00000408813 74 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 RNU6-971P-201ENST00000516920 106 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 RNU7-35P-201ENST00000517174 62 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
RTP3Q9BQQ7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 RNU6-949P-201ENST00000384040 107 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 MIR520F-201ENST00000384824 87 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 MIR125B2-201ENST00000385128 89 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 MIR1257-201ENST00000408490 117 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 RNA5SP193-201ENST00000410353 107 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 RNU4-69P-201ENST00000410677 143 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 SUMO1P3-201ENST00000439961 304 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 RNU6-781P-201ENST00000516377 101 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 MIR4804-201ENST00000581683 73 ntBASIC0.76□□□□□ -2.29
RTP3Q9BQQ7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 MIR539-201ENST00000365690 78 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 RNU7-56P-201ENST00000458744 62 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 RNU6-1061P-201ENST00000516530 99 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
RTP3Q9BQQ7 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
RTP3Q9BQQ7 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms