Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR5589-201ENST00000579442 60 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 MIR4719-201ENST00000585233 84 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 MIR6828-201ENST00000636181 60 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 Y_RNA.52-201ENST00000362760 96 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 RNA5SP117-201ENST00000365294 118 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 RNU6-1336P-201ENST00000383886 109 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 SNORA18-201ENST00000384416 132 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 RNU4-70P-201ENST00000384579 139 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 Y_RNA.549-201ENST00000384657 102 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 SNORA20-201ENST00000384662 132 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 RNU7-35P-201ENST00000517174 62 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
FOXC2Q99958 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 Y_RNA.171-201ENST00000363760 102 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 RNU6-47P-201ENST00000383866 107 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 RNY1P6-201ENST00000384193 109 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 Y_RNA.452-201ENST00000384202 108 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 Y_RNA.470-201ENST00000384307 117 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 RNA5SP237-201ENST00000410414 113 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.19□□□□□ -2.38
FOXC2Q99958 MIR4305-201ENST00000583252 102 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 AC009779.6-201ENST00000603972 165 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.19□□□□□ -2.38
FOXC2Q99958 MIR411-201ENST00000362239 96 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 Y_RNA.32-201ENST00000362589 110 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 RNU6-1082P-201ENST00000364574 107 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 RNU6-312P-201ENST00000364629 107 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 Y_RNA.307-201ENST00000365022 117 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 RNU6-768P-201ENST00000384683 107 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 MIR644A-201ENST00000385262 94 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
FOXC2Q99958 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 AL118496.2-201ENST00000448300 230 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 RNU7-79P-201ENST00000516082 62 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 SNORA25.12-201ENST00000516202 82 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 SNORA31.14-201ENST00000516728 116 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 RNU7-70P-201ENST00000516941 66 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
FOXC2Q99958 Y_RNA.120-201ENST00000363304 110 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 Y_RNA.200-201ENST00000364018 102 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 RNU4-16P-201ENST00000364737 141 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 SNORA20.1-201ENST00000364790 130 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 RNU6-702P-201ENST00000364982 107 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 Y_RNA.515-201ENST00000384535 112 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 RNU6-291P-201ENST00000384720 107 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 AL512326.2-201ENST00000426359 151 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 SNRPGP12-201ENST00000449481 213 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 RNU7-121P-201ENST00000516604 62 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 SNORA25.16-201ENST00000516741 121 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 RNU2-60P-201ENST00000517290 128 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 AC022523.2-201ENST00000561045 150 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 SNORA25.18-201ENST00000607153 114 ntBASIC0.17□□□□□ -2.38
FOXC2Q99958 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.174-201ENST00000363781 105 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.357-201ENST00000365487 109 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.366-201ENST00000365540 102 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.497-201ENST00000384447 98 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.536-201ENST00000384621 113 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.567-201ENST00000384736 106 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 RNU6-1194P-201ENST00000516208 104 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 RNA5SP47-201ENST00000517230 109 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.16□□□□□ -2.38
FOXC2Q99958 AC099654.10-201ENST00000640395 161 ntBASIC0.16□□□□□ -2.38
FOXC2Q99958 Y_RNA.83-201ENST00000363005 113 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 RNU6-196P-201ENST00000384315 107 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 RNU6-463P-201ENST00000384340 107 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 SNORD28-201ENST00000384706 75 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 MIR1270-201ENST00000459320 83 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 RNU6-1219P-201ENST00000516143 112 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 RNU2-35P-201ENST00000516446 142 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 MTND5P34-201ENST00000568888 325 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 AC130289.1-201ENST00000577321 73 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 AC011603.4-201ENST00000611325 277 ntBASIC0.15□□□□□ -2.39
FOXC2Q99958 RNY1P11-201ENST00000363759 113 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 Y_RNA.233-201ENST00000364407 101 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 SNORA2A-201ENST00000383885 135 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 RNU6-574P-201ENST00000384265 107 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 Y_RNA.521-201ENST00000384560 114 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 Y_RNA.531-201ENST00000384589 121 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 RNU2-59P-201ENST00000410482 191 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 SNORD71-201ENST00000411292 86 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 Z95118.1-201ENST00000421372 247 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 RNU6-135P-201ENST00000516769 101 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 RNA5SP268-201ENST00000516828 124 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 SCARNA16.5-201ENST00000517114 183 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.14□□□□□ -2.39
FOXC2Q99958 MIR3646-201ENST00000578301 84 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.14□□□□□ -2.39
FOXC2Q99958 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.14□□□□□ -2.39
FOXC2Q99958 RNA5SP245-201ENST00000364239 121 ntBASIC0.13□□□□□ -2.39
FOXC2Q99958 Y_RNA.337-201ENST00000365312 102 ntBASIC0.13□□□□□ -2.39
FOXC2Q99958 RNU6-815P-201ENST00000384080 113 ntBASIC0.13□□□□□ -2.39
FOXC2Q99958 SNORA75.5-201ENST00000391291 81 ntBASIC0.13□□□□□ -2.39
FOXC2Q99958 RPL39P25-201ENST00000449384 154 ntBASIC0.13□□□□□ -2.39
FOXC2Q99958 snoU13.19-201ENST00000459148 104 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms