Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 FAM71BP1-201ENST00000604431 523 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 Y_RNA.773-201ENST00000607168 90 ntBASIC1.1□□□□□ -2.23
PKP4Q99569 MIR377-201ENST00000362145 69 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-363P-201ENST00000362895 105 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 Y_RNA.116-201ENST00000363292 103 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-1014P-201ENST00000383940 103 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-616P-201ENST00000384353 107 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-1237P-201ENST00000384777 107 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 MIR588-201ENST00000384900 83 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-816P-201ENST00000390914 107 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-1268P-201ENST00000391214 107 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RNU6-1239P-201ENST00000391310 107 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 RPL39P25-201ENST00000449384 154 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 AC048334.1-201ENST00000477975 159 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 MIR5009-201ENST00000578736 100 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 MIR1255B1-201ENST00000636325 63 ntBASIC1.09□□□□□ -2.23
PKP4Q99569 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PKP4Q99569 RNU6-153P-201ENST00000364422 104 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 RNU6-53P-201ENST00000365367 106 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 RNU6-106P-201ENST00000384405 107 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 RNU6-205P-201ENST00000390858 107 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 AC141846.1-201ENST00000568348 142 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 SEPT14P17-201ENST00000617978 177 ntBASIC1.08□□□□□ -2.24
PKP4Q99569 Y_RNA.163-201ENST00000363702 113 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 RNU6-654P-201ENST00000364373 107 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 RNU4-67P-201ENST00000364569 141 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 MIR563-201ENST00000385080 79 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 MIR1302-5-201ENST00000408164 150 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 AL031737.1-201ENST00000450125 223 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 RNU7-62P-201ENST00000458856 62 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 MIR6740-201ENST00000618268 113 ntBASIC1.07□□□□□ -2.24
PKP4Q99569 SNORD114-10-201ENST00000363409 72 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 Y_RNA.155-201ENST00000363632 101 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 RNY1P13-201ENST00000365030 105 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 RNU6-580P-201ENST00000365159 107 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 RNU6-409P-201ENST00000384114 104 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 RNU6-554P-201ENST00000410466 106 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 UBL5P1-201ENST00000507979 193 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 RNU7-2P-201ENST00000516096 62 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 SNORD67.1-201ENST00000516618 108 ntBASIC1.06□□□□□ -2.24
PKP4Q99569 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
PKP4Q99569 Y_RNA.168-201ENST00000363740 102 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 SNORD115-35-201ENST00000365122 82 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 RNU6-147P-201ENST00000383983 107 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 MIR206-201ENST00000384872 86 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 SNORA75.2-201ENST00000391138 150 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 SNORA75.3-201ENST00000391231 150 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 RNU6-1165P-201ENST00000410119 107 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 RNA5SP95-201ENST00000410319 137 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 RNU6-733P-201ENST00000410759 104 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 RNU6-521P-201ENST00000516663 105 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 RNU7-137P-201ENST00000516788 62 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 MIR6504-201ENST00000613520 61 ntBASIC1.05□□□□□ -2.24
PKP4Q99569 MIR30D-201ENST00000362283 70 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 Y_RNA.330-201ENST00000365230 109 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 Y_RNA.363-201ENST00000365529 113 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 RNU6-949P-201ENST00000384040 107 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 RNU6-1113P-201ENST00000384348 107 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 SNORA80D-201ENST00000384488 135 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 MT-TF-201ENST00000387314 71 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 SNORA7.5-201ENST00000410672 110 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 SNORD79.1-201ENST00000516069 84 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 RNU6-1018P-201ENST00000516577 106 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 SNORA4-201ENST00000584302 138 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
PKP4Q99569 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
PKP4Q99569 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-766P-201ENST00000362478 107 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 Y_RNA.78-201ENST00000362970 110 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 SNORD113.3-201ENST00000364630 78 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 Y_RNA.360-201ENST00000365512 102 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-756P-201ENST00000383997 107 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-447P-201ENST00000410293 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-1118P-201ENST00000410382 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-1076P-201ENST00000410397 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-355P-201ENST00000410427 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-791P-201ENST00000410467 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-705P-201ENST00000410601 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-1100P-201ENST00000410691 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-860P-201ENST00000410860 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-1217P-201ENST00000411276 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU6-785P-201ENST00000411324 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 MIR18B-201ENST00000454574 71 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 RNU7-21P-201ENST00000459430 62 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 U6.90-201ENST00000614007 104 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 391.8 ms