Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 MIR6082-201ENST00000613604 109 ntBASIC0.49□□□□□ -2.33
RFFLQ8WZ73 AC141273.2-201ENST00000618989 130 ntBASIC0.49□□□□□ -2.33
RFFLQ8WZ73 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.49□□□□□ -2.33
RFFLQ8WZ73 Y_RNA.42-201ENST00000362660 108 ntBASIC0.48□□□□□ -2.33
RFFLQ8WZ73 SNORD18B-201ENST00000365659 72 ntBASIC0.48□□□□□ -2.33
RFFLQ8WZ73 SNORD37.2-201ENST00000391075 66 ntBASIC0.48□□□□□ -2.33
RFFLQ8WZ73 RNU7-79P-201ENST00000516082 62 ntBASIC0.48□□□□□ -2.33
RFFLQ8WZ73 RNA5SP33-201ENST00000516687 98 ntBASIC0.48□□□□□ -2.33
RFFLQ8WZ73 MIR3646-201ENST00000578301 84 ntBASIC0.48□□□□□ -2.33
RFFLQ8WZ73 RNU6-349P-201ENST00000362402 107 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 Y_RNA.68-201ENST00000362881 102 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 Y_RNA.274-201ENST00000364714 101 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 RNY1P13-201ENST00000365030 105 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 Y_RNA.552-201ENST00000384665 112 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 RNU6-239P-201ENST00000390990 99 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 RNA5SP94-201ENST00000516917 108 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 AC011603.4-201ENST00000611325 277 ntBASIC0.47□□□□□ -2.33
RFFLQ8WZ73 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
RFFLQ8WZ73 MIR1197-201ENST00000408818 88 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.617-201ENST00000410920 90 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 SNORA40.8-201ENST00000411034 126 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 RNU6-1258P-201ENST00000516911 111 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 RNU6-765P-201ENST00000516916 99 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 DEFB131E-201ENST00000532329 154 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 AP002392.1-201ENST00000537692 208 ntBASIC0.46□□□□□ -2.34
RFFLQ8WZ73 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
RFFLQ8WZ73 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.476-201ENST00000384347 108 ntBASIC0.45□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.588-201ENST00000391254 102 ntBASIC0.45□□□□□ -2.34
RFFLQ8WZ73 RNU6-588P-201ENST00000410281 105 ntBASIC0.45□□□□□ -2.34
RFFLQ8WZ73 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.45□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.567-201ENST00000384736 106 ntBASIC0.44□□□□□ -2.34
RFFLQ8WZ73 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
RFFLQ8WZ73 RNU6-379P-201ENST00000363813 104 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 RNU6-1318P-201ENST00000365389 103 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.497-201ENST00000384447 98 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 RNA5SP236-201ENST00000516169 116 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.697-201ENST00000516776 113 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 AC133485.4-201ENST00000561835 220 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 AC138907.4-201ENST00000570107 226 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 MIR4305-201ENST00000583252 102 ntBASIC0.43□□□□□ -2.34
RFFLQ8WZ73 SNORD115-2-201ENST00000362842 82 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 RNU4-84P-201ENST00000364200 139 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 SNORD115-20-201ENST00000365099 82 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 SNORA32-201ENST00000384072 121 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.433-201ENST00000384089 102 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.470-201ENST00000384307 117 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 MIR644A-201ENST00000385262 94 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 AL512326.2-201ENST00000426359 151 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
RFFLQ8WZ73 RNU7-35P-201ENST00000517174 62 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 MIR2909-201ENST00000617113 69 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 AC078938.1-201ENST00000620993 318 ntBASIC0.42□□□□□ -2.34
RFFLQ8WZ73 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.120-201ENST00000363304 110 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.178-201ENST00000363832 102 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.531-201ENST00000384589 121 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 RNU6-388P-201ENST00000517012 105 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 RNU6-389P-201ENST00000517048 105 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 DNAJC19P2-201ENST00000593340 302 ntBASIC0.41□□□□□ -2.34
RFFLQ8WZ73 Y_RNA.536-201ENST00000384621 113 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 RNU6-535P-201ENST00000384722 107 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 MT-TG-201ENST00000387429 68 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 Y_RNA.584-201ENST00000391090 114 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 Y_RNA.662-201ENST00000516028 97 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 RNU6-240P-201ENST00000516098 97 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 SNORA25.16-201ENST00000516741 121 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 RNU6-135P-201ENST00000516769 101 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 AC022523.2-201ENST00000561045 150 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 AC023932.2-201ENST00000603176 175 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 AC021443.1-201ENST00000604478 211 ntBASIC0.4□□□□□ -2.35
RFFLQ8WZ73 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.4□□□□□ -2.35
RFFLQ8WZ73 RNU4-58P-201ENST00000363192 141 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 RNU6-1229P-201ENST00000364295 107 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 RNU6-200P-201ENST00000364743 107 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 AC096949.1-201ENST00000412047 152 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 RNU7-164P-201ENST00000459221 62 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 RNU6-1194P-201ENST00000516208 104 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 SNORA25.18-201ENST00000607153 114 ntBASIC0.39□□□□□ -2.35
RFFLQ8WZ73 Y_RNA.240-201ENST00000364469 95 ntBASIC0.38□□□□□ -2.35
RFFLQ8WZ73 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.38□□□□□ -2.35
RFFLQ8WZ73 RNU7-121P-201ENST00000516604 62 ntBASIC0.38□□□□□ -2.35
RFFLQ8WZ73 SNORA62.5-201ENST00000516634 120 ntBASIC0.38□□□□□ -2.35
RFFLQ8WZ73 SNORA31.14-201ENST00000516728 116 ntBASIC0.38□□□□□ -2.35
RFFLQ8WZ73 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.38□□□□□ -2.35
RFFLQ8WZ73 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
RFFLQ8WZ73 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
RFFLQ8WZ73 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
RFFLQ8WZ73 MTND5P34-201ENST00000568888 325 ntBASIC0.37□□□□□ -2.35
RFFLQ8WZ73 MIR548AE2-201ENST00000583456 67 ntBASIC0.37□□□□□ -2.35
RFFLQ8WZ73 MIR101-2-201ENST00000362195 79 ntBASIC0.36□□□□□ -2.35
RFFLQ8WZ73 Y_RNA.29-201ENST00000362570 113 ntBASIC0.36□□□□□ -2.35
RFFLQ8WZ73 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 433.5 ms