Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 RNU4-84P-201ENST00000364200 139 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.497-201ENST00000384447 98 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 U8.15-201ENST00000390947 134 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 RNU6-239P-201ENST00000390990 99 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 AC090897.1-201ENST00000580909 226 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
NPHP3Q7Z494 RNU6-508P-201ENST00000363231 103 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 RNU6-682P-201ENST00000363843 106 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.470-201ENST00000384307 117 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 SNORA75.5-201ENST00000391291 81 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 RNA5SP144-201ENST00000410846 116 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 RNU4-83P-201ENST00000410863 133 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 RPL39P25-201ENST00000449384 154 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 RNU2-60P-201ENST00000517290 128 ntBASIC0.54□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.240-201ENST00000364469 95 ntBASIC0.53□□□□□ -2.32
NPHP3Q7Z494 RNU7-120P-201ENST00000459334 63 ntBASIC0.53□□□□□ -2.32
NPHP3Q7Z494 AC074198.2-201ENST00000508153 258 ntBASIC0.53□□□□□ -2.32
NPHP3Q7Z494 RNU7-121P-201ENST00000516604 62 ntBASIC0.53□□□□□ -2.32
NPHP3Q7Z494 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
NPHP3Q7Z494 RNU6-403P-201ENST00000363163 104 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 RNU4-67P-201ENST00000364569 141 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.257-201ENST00000364596 102 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.617-201ENST00000410920 90 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 AC096949.1-201ENST00000412047 152 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 HAR1A.1-201ENST00000459583 118 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 MIR8066-201ENST00000617280 78 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
NPHP3Q7Z494 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
NPHP3Q7Z494 RNY1P13-201ENST00000365030 105 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 RNU6-690P-201ENST00000365242 106 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 MIR140-201ENST00000385282 100 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 SNORD37.2-201ENST00000391075 66 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 SNORD100-201ENST00000408573 76 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 AL512326.2-201ENST00000426359 151 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 RNU6-893P-201ENST00000458841 100 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 AC002350.1-201ENST00000490759 375 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.662-201ENST00000516028 97 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 RNU6-240P-201ENST00000516098 97 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 SNORA81.3-201ENST00000517283 198 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 MIR3646-201ENST00000578301 84 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 MIR4491-201ENST00000581087 68 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 AC004792.1-201ENST00000614523 137 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.51□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.13-201ENST00000362403 112 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.29-201ENST00000362570 113 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 RNU6-949P-201ENST00000384040 107 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 RNU6-679P-201ENST00000391003 106 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.588-201ENST00000391254 102 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 AL022718.1-201ENST00000412004 84 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 RNU7-113P-201ENST00000459273 62 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 RNU7-79P-201ENST00000516082 62 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 RNA5SP285-201ENST00000516619 119 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 DNAJC19P2-201ENST00000593340 302 ntBASIC0.5□□□□□ -2.33
NPHP3Q7Z494 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.5□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.42-201ENST00000362660 108 ntBASIC0.49□□□□□ -2.33
NPHP3Q7Z494 SNORA32-201ENST00000384072 121 ntBASIC0.49□□□□□ -2.33
NPHP3Q7Z494 RNU2-35P-201ENST00000516446 142 ntBASIC0.49□□□□□ -2.33
NPHP3Q7Z494 RNA5SP33-201ENST00000516687 98 ntBASIC0.49□□□□□ -2.33
NPHP3Q7Z494 RNU6-448P-201ENST00000517052 107 ntBASIC0.49□□□□□ -2.33
NPHP3Q7Z494 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.49□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.120-201ENST00000363304 110 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 RNU6-309P-201ENST00000364573 106 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.272-201ENST00000364696 102 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 RNU6-1318P-201ENST00000365389 103 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 RNU6-1086P-201ENST00000410930 100 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.686-201ENST00000516548 134 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
NPHP3Q7Z494 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.441-201ENST00000384123 112 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 SNORA72.6-201ENST00000384520 129 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 RNU6-1135P-201ENST00000411083 103 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.651-201ENST00000459380 103 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 RNU7-35P-201ENST00000517174 62 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 MIR6082-201ENST00000613604 109 ntBASIC0.47□□□□□ -2.33
NPHP3Q7Z494 Y_RNA.785-201ENST00000384290 109 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.584-201ENST00000391090 114 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 MTATP6P21-201ENST00000440681 189 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 SNORA25.16-201ENST00000516741 121 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 AP003327.1-201ENST00000529684 127 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 AC133485.4-201ENST00000561835 220 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 AC138907.4-201ENST00000570107 226 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 MIR548AE2-201ENST00000583456 67 ntBASIC0.46□□□□□ -2.34
NPHP3Q7Z494 SNORD115-2-201ENST00000362842 82 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 SNORD115-20-201ENST00000365099 82 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 RNU4-11P-201ENST00000365287 132 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 SNORD18B-201ENST00000365659 72 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.531-201ENST00000384589 121 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.700-201ENST00000516806 100 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 AC112693.2-201ENST00000556538 232 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 AC021443.1-201ENST00000604478 211 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 AC011603.4-201ENST00000611325 277 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 MIR6718-201ENST00000616153 80 ntBASIC0.45□□□□□ -2.34
NPHP3Q7Z494 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
NPHP3Q7Z494 RNU6-151P-201ENST00000364158 107 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.294-201ENST00000364916 102 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 RNU6-1130P-201ENST00000365434 107 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms