Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.354-201ENST00000365448 111 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 Y_RNA.360-201ENST00000365512 102 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 MIR577-201ENST00000385196 96 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 SNORD77B-201ENST00000391112 67 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 SNORA44.1-201ENST00000517031 108 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 AL512310.8-201ENST00000550183 120 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 AP001318.4-201ENST00000616637 121 ntBASIC1.62□□□□□ -2.15
KRT40Q6A162 Y_RNA.78-201ENST00000362970 110 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 RNU6-1099P-201ENST00000363533 107 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 SNORD114-27-201ENST00000363766 70 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 Y_RNA.178-201ENST00000363832 102 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 Y_RNA.507-201ENST00000384500 99 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 SNORA7.5-201ENST00000410672 110 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 RPS29P1-201ENST00000465274 159 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 RNU7-79P-201ENST00000516082 62 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 SNORD67.1-201ENST00000516618 108 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 RNU6-521P-201ENST00000516663 105 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 AC141557.1-201ENST00000540982 400 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 MIR3937-201ENST00000580135 106 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 uc_338.6-201ENST00000613544 171 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 MIR6740-201ENST00000618268 113 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 MIR6516-201ENST00000630554 81 ntBASIC1.61□□□□□ -2.15
KRT40Q6A162 Y_RNA.155-201ENST00000363632 101 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 RNY1P13-201ENST00000365030 105 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 RNU6-409P-201ENST00000384114 104 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 RNU6-1237P-201ENST00000384777 107 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 MIR520E-201ENST00000384867 87 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 MIR206-201ENST00000384872 86 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 RNU6-733P-201ENST00000410759 104 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 AL133373.1-201ENST00000497098 94 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.6□□□□□ -2.15
KRT40Q6A162 FAM71BP1-201ENST00000604431 523 ntBASIC1.6□□□□□ -2.15
KRT40Q6A162 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.6□□□□□ -2.15
KRT40Q6A162 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRT40Q6A162 RNA5SP264-201ENST00000363115 107 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 MIR598-201ENST00000384868 97 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 MIR563-201ENST00000385080 79 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 RNU6-1086P-201ENST00000410930 100 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 snoU13.2-201ENST00000459201 104 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 Y_RNA.677-201ENST00000516401 85 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 RNU7-137P-201ENST00000516788 62 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 MIR4694-201ENST00000578534 80 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 AL662814.1-201ENST00000617364 121 ntBASIC1.59□□□□□ -2.15
KRT40Q6A162 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
KRT40Q6A162 RNY3P2-201ENST00000362918 102 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RNU1-93P-201ENST00000364704 169 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 SNORD115-35-201ENST00000365122 82 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RPL39P39-201ENST00000455840 151 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RPL30P7-201ENST00000479312 323 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 UBL5P1-201ENST00000507979 193 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RNU7-2P-201ENST00000516096 62 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 RNA5SP170-201ENST00000517150 101 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 AC141846.1-201ENST00000568348 142 ntBASIC1.58□□□□□ -2.16
KRT40Q6A162 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRT40Q6A162 MIR103A2-201ENST00000362154 78 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 RNU6-396P-201ENST00000365369 105 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 RNU6-1201P-201ENST00000384227 107 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KRT40Q6A162 RNU6-205P-201ENST00000390858 107 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.57□□□□□ -2.16
KRT40Q6A162 Y_RNA.30-201ENST00000362572 97 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 RNU6-1313P-201ENST00000362622 102 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 RNU6-832P-201ENST00000363319 107 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 Y_RNA.247-201ENST00000364500 92 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 RNU6-1113P-201ENST00000384348 107 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 MIR588-201ENST00000384900 83 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 RNU6-1321P-201ENST00000390905 107 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 DEFB131E-201ENST00000532329 154 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 MIR4264-201ENST00000583520 66 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 MIR6078-201ENST00000611069 100 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 AC105081.1-201ENST00000617727 106 ntBASIC1.56□□□□□ -2.16
KRT40Q6A162 MIR30D-201ENST00000362283 70 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 Y_RNA.363-201ENST00000365529 113 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 MT-TN-201ENST00000387400 73 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 RNU6-613P-201ENST00000410412 108 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 AC096949.1-201ENST00000412047 152 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 AC048334.1-201ENST00000477975 159 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 RNA5SP436-201ENST00000516020 115 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 RNU6-1018P-201ENST00000516577 106 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 MIR2115-201ENST00000516657 100 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 RNU6-1006P-201ENST00000516998 103 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 Y_RNA.818-201ENST00000618813 71 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 AC091304.10-201ENST00000641554 121 ntBASIC1.55□□□□□ -2.16
KRT40Q6A162 Y_RNA.43-201ENST00000362670 111 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 Y_RNA.377-201ENST00000365644 108 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 Y_RNA.448-201ENST00000384185 108 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 Y_RNA.544-201ENST00000384650 113 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 MIR34C-201ENST00000384831 77 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 RNU6-1054P-201ENST00000411293 104 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms