Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 MIR1263-201ENST00000408324 86 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 RNU7-79P-201ENST00000516082 62 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 RNU6-1234P-201ENST00000516877 103 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 AC141846.1-201ENST00000568348 142 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 AC025627.3-201ENST00000582078 182 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 MIR548AE2-201ENST00000583456 67 ntBASIC0.84□□□□□ -2.27
KRTCAP3Q53RY4 Y_RNA.218-201ENST00000364218 104 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 SNORA32-201ENST00000384072 121 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.525-201ENST00000384570 113 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 RNU7-107P-201ENST00000459121 61 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 MIR1270-201ENST00000459320 83 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 RNU7-35P-201ENST00000517174 62 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 AC020891.4-201ENST00000605745 93 ntBASIC0.83□□□□□ -2.28
KRTCAP3Q53RY4 RNY1P13-201ENST00000365030 105 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.630-201ENST00000411370 108 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 TMSB4XP3-201ENST00000445144 114 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 RPL39P25-201ENST00000449384 154 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-977P-201ENST00000516411 103 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-1061P-201ENST00000516530 99 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 MIR3910-1-201ENST00000580936 111 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 AC023934.1-201ENST00000574529 2389 ntBASIC0.82□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.71-201ENST00000362892 104 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 SNORD58C-201ENST00000365223 64 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-81P-201ENST00000365608 104 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-80P-201ENST00000384195 107 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-959P-201ENST00000384671 107 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 U8.15-201ENST00000390947 134 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 RNU4-69P-201ENST00000410677 143 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.81□□□□□ -2.28
KRTCAP3Q53RY4 AL589743.1-201ENST00000551932 2712 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-949P-201ENST00000384040 107 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.528-201ENST00000384575 108 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 MIR1257-201ENST00000408490 117 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 RNA5SP136-201ENST00000410906 107 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 AC096949.1-201ENST00000412047 152 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 RNU7-185P-201ENST00000459215 60 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-772P-201ENST00000516042 105 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 MIR4676-201ENST00000583078 72 ntBASIC0.8□□□□□ -2.28
KRTCAP3Q53RY4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.198-201ENST00000364013 98 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 MIR520F-201ENST00000384824 87 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-735P-201ENST00000410612 107 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 RNU6-659P-201ENST00000516454 104 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 AL359881.1-201ENST00000602916 267 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 AC025166.1-201ENST00000612411 163 ntBASIC0.79□□□□□ -2.28
KRTCAP3Q53RY4 MTND5P18-201ENST00000445624 1801 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 SNORD114-26-201ENST00000363543 72 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 MIR125B2-201ENST00000385128 89 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 MIR938-201ENST00000401216 83 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 SNORD99-201ENST00000408612 74 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 SNORD67.1-201ENST00000516618 108 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 RNA5SP480-201ENST00000516840 109 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 RNU7-6P-201ENST00000516845 62 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 MIR4804-201ENST00000581683 73 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 AC087741.2-201ENST00000619415 172 ntBASIC0.78□□□□□ -2.28
KRTCAP3Q53RY4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 SNORD93-201ENST00000408813 74 ntBASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 RNU7-56P-201ENST00000458744 62 ntBASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 COX6CP6-201ENST00000490840 228 ntBASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 RNU7-137P-201ENST00000516788 62 ntBASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.77□□□□□ -2.29
KRTCAP3Q53RY4 AL157777.2-201ENST00000258070 137 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 RNU6-364P-201ENST00000384387 107 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 Y_RNA.712-201ENST00000517011 92 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 MIR4491-201ENST00000581087 68 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 AC105081.1-201ENST00000617727 106 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 AC132825.6-201ENST00000638861 357 ntBASIC0.76□□□□□ -2.29
KRTCAP3Q53RY4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 Y_RNA.261-201ENST00000364631 102 ntBASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 SNORD116-14-201ENST00000383894 92 ntBASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 SNORD116-17-201ENST00000383929 92 ntBASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 RNU6-616P-201ENST00000384353 107 ntBASIC0.75□□□□□ -2.29
KRTCAP3Q53RY4 SNORD116-15-201ENST00000384445 92 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms