Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.78-201ENST00000362970 110 ntBASIC1.01□□□□□ -2.25
LMO4P61968 Y_RNA.354-201ENST00000365448 111 ntBASIC1.01□□□□□ -2.25
LMO4P61968 Y_RNA.360-201ENST00000365512 102 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-409P-201ENST00000384114 104 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-1113P-201ENST00000384348 107 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-679P-201ENST00000391003 106 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-1307P-201ENST00000391012 103 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-955P-201ENST00000410497 104 ntBASIC1.01□□□□□ -2.25
LMO4P61968 SNORA7.5-201ENST00000410672 110 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-733P-201ENST00000410759 104 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-947P-201ENST00000516264 106 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU6-521P-201ENST00000516663 105 ntBASIC1.01□□□□□ -2.25
LMO4P61968 RNU7-35P-201ENST00000517174 62 ntBASIC1.01□□□□□ -2.25
LMO4P61968 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
LMO4P61968 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LMO4P61968 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
LMO4P61968 RNU6-1099P-201ENST00000363533 107 ntBASIC1□□□□□ -2.25
LMO4P61968 Y_RNA.544-201ENST00000384650 113 ntBASIC1□□□□□ -2.25
LMO4P61968 SNORD38B-201ENST00000384690 67 ntBASIC1□□□□□ -2.25
LMO4P61968 MIR577-201ENST00000385196 96 ntBASIC1□□□□□ -2.25
LMO4P61968 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1□□□□□ -2.25
LMO4P61968 Y_RNA.694-201ENST00000516677 117 ntBASIC1□□□□□ -2.25
LMO4P61968 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
LMO4P61968 MIR4694-201ENST00000578534 80 ntBASIC1□□□□□ -2.25
LMO4P61968 FAM71BP1-201ENST00000604431 523 ntBASIC1□□□□□ -2.25
LMO4P61968 PRELID3BP2-201ENST00000605362 201 ntBASIC1□□□□□ -2.25
LMO4P61968 Y_RNA.818-201ENST00000618813 71 ntBASIC1□□□□□ -2.25
LMO4P61968 SNORD38B-202ENST00000625943 69 ntBASIC1□□□□□ -2.25
LMO4P61968 RNY3P2-201ENST00000362918 102 ntBASIC0.99□□□□□ -2.25
LMO4P61968 RNU6-832P-201ENST00000363319 107 ntBASIC0.99□□□□□ -2.25
LMO4P61968 RNU6-1255P-201ENST00000363434 112 ntBASIC0.99□□□□□ -2.25
LMO4P61968 MIR206-201ENST00000384872 86 ntBASIC0.99□□□□□ -2.25
LMO4P61968 RNU6-1086P-201ENST00000410930 100 ntBASIC0.99□□□□□ -2.25
LMO4P61968 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
LMO4P61968 RNU7-79P-201ENST00000516082 62 ntBASIC0.99□□□□□ -2.25
LMO4P61968 AP003716.2-201ENST00000528260 108 ntBASIC0.99□□□□□ -2.25
LMO4P61968 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
LMO4P61968 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
LMO4P61968 RNA5SP327-201ENST00000362494 101 ntBASIC0.98□□□□□ -2.25
LMO4P61968 RNU4-36P-201ENST00000364294 144 ntBASIC0.98□□□□□ -2.25
LMO4P61968 SNORD115-35-201ENST00000365122 82 ntBASIC0.98□□□□□ -2.25
LMO4P61968 RNU6-1201P-201ENST00000384227 107 ntBASIC0.98□□□□□ -2.25
LMO4P61968 RNU6-1237P-201ENST00000384777 107 ntBASIC0.98□□□□□ -2.25
LMO4P61968 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
LMO4P61968 RPL39P39-201ENST00000455840 151 ntBASIC0.98□□□□□ -2.25
LMO4P61968 RNU7-2P-201ENST00000516096 62 ntBASIC0.98□□□□□ -2.25
LMO4P61968 SNORA40.13-201ENST00000516379 120 ntBASIC0.98□□□□□ -2.25
LMO4P61968 RNU7-40P-201ENST00000516397 64 ntBASIC0.98□□□□□ -2.25
LMO4P61968 SNORD67.1-201ENST00000516618 108 ntBASIC0.98□□□□□ -2.25
LMO4P61968 DEFB131E-201ENST00000532329 154 ntBASIC0.98□□□□□ -2.25
LMO4P61968 MIR5582-201ENST00000579697 68 ntBASIC0.98□□□□□ -2.25
LMO4P61968 uc_338.6-201ENST00000613544 171 ntBASIC0.98□□□□□ -2.25
LMO4P61968 MIR7974-201ENST00000615835 79 ntBASIC0.98□□□□□ -2.25
LMO4P61968 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
LMO4P61968 MIR96-201ENST00000362288 78 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNU6-1313P-201ENST00000362622 102 ntBASIC0.97□□□□□ -2.25
LMO4P61968 Y_RNA.191-201ENST00000363972 113 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNU6-654P-201ENST00000364373 107 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNY1P13-201ENST00000365030 105 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNU6-396P-201ENST00000365369 105 ntBASIC0.97□□□□□ -2.25
LMO4P61968 MIR488-201ENST00000365739 83 ntBASIC0.97□□□□□ -2.25
LMO4P61968 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNY4P30-201ENST00000410216 95 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
LMO4P61968 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
LMO4P61968 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
LMO4P61968 SCARNA23-201ENST00000516060 130 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNU7-137P-201ENST00000516788 62 ntBASIC0.97□□□□□ -2.25
LMO4P61968 RNU6-158P-201ENST00000517104 100 ntBASIC0.97□□□□□ -2.25
LMO4P61968 AC141846.1-201ENST00000568348 142 ntBASIC0.97□□□□□ -2.25
LMO4P61968 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.97□□□□□ -2.25
LMO4P61968 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
LMO4P61968 AL662814.1-201ENST00000617364 121 ntBASIC0.97□□□□□ -2.25
LMO4P61968 MIR6516-201ENST00000630554 81 ntBASIC0.97□□□□□ -2.25
LMO4P61968 MIR103A2-201ENST00000362154 78 ntBASIC0.96□□□□□ -2.26
LMO4P61968 RNA5SP264-201ENST00000363115 107 ntBASIC0.96□□□□□ -2.26
LMO4P61968 Y_RNA.107-201ENST00000363190 121 ntBASIC0.96□□□□□ -2.26
LMO4P61968 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
LMO4P61968 Y_RNA.377-201ENST00000365644 108 ntBASIC0.96□□□□□ -2.26
LMO4P61968 Y_RNA.448-201ENST00000384185 108 ntBASIC0.96□□□□□ -2.26
LMO4P61968 Y_RNA.466-201ENST00000384294 113 ntBASIC0.96□□□□□ -2.26
LMO4P61968 MIR588-201ENST00000384900 83 ntBASIC0.96□□□□□ -2.26
LMO4P61968 RNU6-205P-201ENST00000390858 107 ntBASIC0.96□□□□□ -2.26
LMO4P61968 RNA5SP237-201ENST00000410414 113 ntBASIC0.96□□□□□ -2.26
LMO4P61968 MTATP8P2-201ENST00000435212 202 ntBASIC0.96□□□□□ -2.26
LMO4P61968 AL133373.1-201ENST00000497098 94 ntBASIC0.96□□□□□ -2.26
LMO4P61968 RNU6-1018P-201ENST00000516577 106 ntBASIC0.96□□□□□ -2.26
LMO4P61968 MIR2115-201ENST00000516657 100 ntBASIC0.96□□□□□ -2.26
LMO4P61968 RNU6-1006P-201ENST00000516998 103 ntBASIC0.96□□□□□ -2.26
LMO4P61968 MIR548Z-201ENST00000584743 97 ntBASIC0.96□□□□□ -2.26
LMO4P61968 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.96□□□□□ -2.26
LMO4P61968 AC105081.1-201ENST00000617727 106 ntBASIC0.96□□□□□ -2.26
LMO4P61968 MIR6740-201ENST00000618268 113 ntBASIC0.96□□□□□ -2.26
LMO4P61968 AL512310.12-203ENST00000640543 90 ntBASIC0.96□□□□□ -2.26
LMO4P61968 AC091304.10-201ENST00000641554 121 ntBASIC0.96□□□□□ -2.26
LMO4P61968 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.96□□□□□ -2.26
LMO4P61968 Y_RNA.10-201ENST00000362371 110 ntBASIC0.95□□□□□ -2.26
LMO4P61968 Y_RNA.93-201ENST00000363066 109 ntBASIC0.95□□□□□ -2.26
LMO4P61968 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
LMO4P61968 Y_RNA.247-201ENST00000364500 92 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms