Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
CCNFP41002 RNU6-644P-201ENST00000391155 98 ntBASIC1.81□□□□□ -2.12
CCNFP41002 AC048334.1-201ENST00000477975 159 ntBASIC1.81□□□□□ -2.12
CCNFP41002 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
CCNFP41002 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
CCNFP41002 MIR4679-1-201ENST00000637619 75 ntBASIC1.81□□□□□ -2.12
CCNFP41002 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCNFP41002 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCNFP41002 Y_RNA.98-201ENST00000363109 102 ntBASIC1.8□□□□□ -2.12
CCNFP41002 Y_RNA.220-201ENST00000364244 109 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
CCNFP41002 Y_RNA.369-201ENST00000365568 117 ntBASIC1.8□□□□□ -2.12
CCNFP41002 Y_RNA.377-201ENST00000365644 108 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-49P-201ENST00000384256 107 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNY1P7-201ENST00000384743 110 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-447P-201ENST00000410293 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-1118P-201ENST00000410382 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-1076P-201ENST00000410397 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-355P-201ENST00000410427 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-791P-201ENST00000410467 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-705P-201ENST00000410601 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-1100P-201ENST00000410691 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-860P-201ENST00000410860 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-1217P-201ENST00000411276 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-785P-201ENST00000411324 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU6-162P-201ENST00000516228 103 ntBASIC1.8□□□□□ -2.12
CCNFP41002 RNU11-2P-201ENST00000516898 142 ntBASIC1.8□□□□□ -2.12
CCNFP41002 AP003716.2-201ENST00000528260 108 ntBASIC1.8□□□□□ -2.12
CCNFP41002 SNORA4-201ENST00000584302 138 ntBASIC1.8□□□□□ -2.12
CCNFP41002 U6.90-201ENST00000614007 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 U6.70-201ENST00000620287 104 ntBASIC1.8□□□□□ -2.12
CCNFP41002 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCNFP41002 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCNFP41002 Y_RNA.4-201ENST00000362333 112 ntBASIC1.79□□□□□ -2.12
CCNFP41002 SNORA2B-201ENST00000384583 137 ntBASIC1.79□□□□□ -2.12
CCNFP41002 MT-TN-201ENST00000387400 73 ntBASIC1.79□□□□□ -2.12
CCNFP41002 AC004941.2-201ENST00000427009 228 ntBASIC1.79□□□□□ -2.12
CCNFP41002 SPINT5P-201ENST00000448174 155 ntBASIC1.79□□□□□ -2.12
CCNFP41002 MALAT1.1-201ENST00000618249 95 ntBASIC1.79□□□□□ -2.12
CCNFP41002 Y_RNA.95-201ENST00000363079 95 ntBASIC1.78□□□□□ -2.12
CCNFP41002 RNU6-60P-201ENST00000364792 103 ntBASIC1.78□□□□□ -2.12
CCNFP41002 RNU6-294P-201ENST00000364999 102 ntBASIC1.78□□□□□ -2.12
CCNFP41002 Y_RNA.467-201ENST00000384297 102 ntBASIC1.78□□□□□ -2.12
CCNFP41002 U8.13-201ENST00000390842 128 ntBASIC1.78□□□□□ -2.12
CCNFP41002 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.78□□□□□ -2.12
CCNFP41002 MRPL35P3-201ENST00000421557 364 ntBASIC1.78□□□□□ -2.12
CCNFP41002 AC109327.2-201ENST00000448339 378 ntBASIC1.78□□□□□ -2.12
CCNFP41002 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
CCNFP41002 SNORA31.2-201ENST00000516019 134 ntBASIC1.78□□□□□ -2.12
CCNFP41002 RNU6-158P-201ENST00000517104 100 ntBASIC1.78□□□□□ -2.12
CCNFP41002 MTND5P40-201ENST00000559945 246 ntBASIC1.78□□□□□ -2.12
CCNFP41002 uc_338.6-201ENST00000613544 171 ntBASIC1.78□□□□□ -2.12
CCNFP41002 SNORD38.1-201ENST00000363863 68 ntBASIC1.77□□□□□ -2.13
CCNFP41002 RNU6-613P-201ENST00000410412 108 ntBASIC1.77□□□□□ -2.13
CCNFP41002 MIR4498-201ENST00000577599 66 ntBASIC1.77□□□□□ -2.13
CCNFP41002 AP001362.1-201ENST00000625165 124 ntBASIC1.77□□□□□ -2.13
CCNFP41002 MIR30D-201ENST00000362283 70 ntBASIC1.76□□□□□ -2.13
CCNFP41002 Y_RNA.342-201ENST00000365352 113 ntBASIC1.76□□□□□ -2.13
CCNFP41002 SNORD38.2-201ENST00000384470 69 ntBASIC1.76□□□□□ -2.13
CCNFP41002 MIR563-201ENST00000385080 79 ntBASIC1.76□□□□□ -2.13
CCNFP41002 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
CCNFP41002 RNU6-1054P-201ENST00000411293 104 ntBASIC1.76□□□□□ -2.13
CCNFP41002 MIR4777-201ENST00000583710 86 ntBASIC1.76□□□□□ -2.13
CCNFP41002 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.76□□□□□ -2.13
CCNFP41002 U7.3-201ENST00000616123 62 ntBASIC1.76□□□□□ -2.13
CCNFP41002 U6.109-201ENST00000636749 87 ntBASIC1.76□□□□□ -2.13
CCNFP41002 Y_RNA.466-201ENST00000384294 113 ntBASIC1.75□□□□□ -2.13
CCNFP41002 U8.15-201ENST00000390947 134 ntBASIC1.75□□□□□ -2.13
CCNFP41002 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
CCNFP41002 RNU6-1053P-201ENST00000515930 101 ntBASIC1.75□□□□□ -2.13
CCNFP41002 RNU6-1006P-201ENST00000516998 103 ntBASIC1.75□□□□□ -2.13
CCNFP41002 RNU6-90P-201ENST00000606352 106 ntBASIC1.75□□□□□ -2.13
CCNFP41002 RNU6-86P-201ENST00000606534 107 ntBASIC1.75□□□□□ -2.13
CCNFP41002 SEPT14P17-201ENST00000617978 177 ntBASIC1.75□□□□□ -2.13
CCNFP41002 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CCNFP41002 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CCNFP41002 Y_RNA.140-201ENST00000363474 103 ntBASIC1.74□□□□□ -2.13
CCNFP41002 Y_RNA.168-201ENST00000363740 102 ntBASIC1.74□□□□□ -2.13
CCNFP41002 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
CCNFP41002 SNORD93-201ENST00000408813 74 ntBASIC1.74□□□□□ -2.13
CCNFP41002 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
CCNFP41002 MIR377-201ENST00000362145 69 ntBASIC1.73□□□□□ -2.13
CCNFP41002 RNA5SP133-201ENST00000363368 119 ntBASIC1.73□□□□□ -2.13
CCNFP41002 Y_RNA.226-201ENST00000364337 114 ntBASIC1.73□□□□□ -2.13
CCNFP41002 MT-TF-201ENST00000387314 71 ntBASIC1.73□□□□□ -2.13
CCNFP41002 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.73□□□□□ -2.13
CCNFP41002 MIR548G-201ENST00000408442 89 ntBASIC1.73□□□□□ -2.13
CCNFP41002 Y_RNA.705-201ENST00000516862 110 ntBASIC1.73□□□□□ -2.13
CCNFP41002 AC023827.1-201ENST00000569247 97 ntBASIC1.73□□□□□ -2.13
CCNFP41002 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCNFP41002 Y_RNA.96-201ENST00000363092 109 ntBASIC1.72□□□□□ -2.13
CCNFP41002 Y_RNA.164-201ENST00000363709 102 ntBASIC1.72□□□□□ -2.13
CCNFP41002 Y_RNA.290-201ENST00000364879 114 ntBASIC1.72□□□□□ -2.13
CCNFP41002 SNORA75.2-201ENST00000391138 150 ntBASIC1.72□□□□□ -2.13
CCNFP41002 SNORA75.3-201ENST00000391231 150 ntBASIC1.72□□□□□ -2.13
CCNFP41002 AC096949.1-201ENST00000412047 152 ntBASIC1.72□□□□□ -2.13
CCNFP41002 snoU13.21-201ENST00000459368 105 ntBASIC1.72□□□□□ -2.13
CCNFP41002 AC138749.4-201ENST00000563970 127 ntBASIC1.72□□□□□ -2.13
CCNFP41002 AC090897.1-201ENST00000580909 226 ntBASIC1.72□□□□□ -2.13
CCNFP41002 AC012676.2-201ENST00000619258 186 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 293.1 ms