Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
ACTN1P12814 RNU2-60P-201ENST00000517290 128 ntBASIC0.63□□□□□ -2.31
ACTN1P12814 MIR3646-201ENST00000578301 84 ntBASIC0.63□□□□□ -2.31
ACTN1P12814 SNORD92-201ENST00000585078 85 ntBASIC0.63□□□□□ -2.31
ACTN1P12814 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.63□□□□□ -2.31
ACTN1P12814 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 Y_RNA.68-201ENST00000362881 102 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 RNA5SP257-201ENST00000363023 116 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 Y_RNA.272-201ENST00000364696 102 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 RNU4-11P-201ENST00000365287 132 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 Y_RNA.584-201ENST00000391090 114 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 Y_RNA.617-201ENST00000410920 90 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 RNU6-1086P-201ENST00000410930 100 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 AL512326.2-201ENST00000426359 151 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 MTATP6P21-201ENST00000440681 189 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 RNU7-121P-201ENST00000516604 62 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 RNA5SP33-201ENST00000516687 98 ntBASIC0.62□□□□□ -2.31
ACTN1P12814 Y_RNA.13-201ENST00000362403 112 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 RNU6-1318P-201ENST00000365389 103 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 SNORD18B-201ENST00000365659 72 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 RNU6-679P-201ENST00000391003 106 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 Y_RNA.686-201ENST00000516548 134 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 AC090897.1-201ENST00000580909 226 ntBASIC0.61□□□□□ -2.31
ACTN1P12814 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ACTN1P12814 Y_RNA.178-201ENST00000363832 102 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 RNY1P13-201ENST00000365030 105 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 Y_RNA.700-201ENST00000516806 100 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 AC133485.4-201ENST00000561835 220 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 AC138907.4-201ENST00000570107 226 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 MIR4305-201ENST00000583252 102 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 AC021443.1-201ENST00000604478 211 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 AC243829.6-201ENST00000612652 106 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 MIR8066-201ENST00000617280 78 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
ACTN1P12814 Y_RNA.8-201ENST00000362353 102 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU6-151P-201ENST00000364158 107 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU6-309P-201ENST00000364573 106 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU6-1130P-201ENST00000365434 107 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU6-949P-201ENST00000384040 107 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 Y_RNA.441-201ENST00000384123 112 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 Y_RNA.785-201ENST00000384290 109 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 AC002350.1-201ENST00000490759 375 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU7-79P-201ENST00000516082 62 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU2-35P-201ENST00000516446 142 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 Y_RNA.690-201ENST00000516603 95 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 RNU6-448P-201ENST00000517052 107 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 AC112693.2-201ENST00000556538 232 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 MIR4491-201ENST00000581087 68 ntBASIC0.59□□□□□ -2.31
ACTN1P12814 Y_RNA.120-201ENST00000363304 110 ntBASIC0.58□□□□□ -2.32
ACTN1P12814 SNORD116-18-201ENST00000383961 92 ntBASIC0.58□□□□□ -2.32
ACTN1P12814 Y_RNA.588-201ENST00000391254 102 ntBASIC0.58□□□□□ -2.32
ACTN1P12814 RNU6-1135P-201ENST00000411083 103 ntBASIC0.58□□□□□ -2.32
ACTN1P12814 RNU7-164P-201ENST00000459221 62 ntBASIC0.58□□□□□ -2.32
ACTN1P12814 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
ACTN1P12814 Y_RNA.42-201ENST00000362660 108 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 SNORD18A-201ENST00000363753 72 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 RNA5SP117-201ENST00000365294 118 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 SNORD100-201ENST00000408573 76 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 AC096949.1-201ENST00000412047 152 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 Y_RNA.651-201ENST00000459380 103 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 SNORA25.16-201ENST00000516741 121 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 RNU6-182P-201ENST00000516970 105 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 MIR548AE2-201ENST00000583456 67 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 AC011603.4-201ENST00000611325 277 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 MIR6082-201ENST00000613604 109 ntBASIC0.57□□□□□ -2.32
ACTN1P12814 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
ACTN1P12814 Y_RNA.150-201ENST00000363562 102 ntBASIC0.56□□□□□ -2.32
ACTN1P12814 VTRNA1-3-201ENST00000365645 89 ntBASIC0.56□□□□□ -2.32
ACTN1P12814 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
ACTN1P12814 Y_RNA.366-201ENST00000365540 102 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 RNU6-449P-201ENST00000383914 107 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 RNU6-804P-201ENST00000384286 107 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 Y_RNA.531-201ENST00000384589 121 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 RNU6-460P-201ENST00000391158 108 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 RNU7-35P-201ENST00000517174 62 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 DEFB131E-201ENST00000532329 154 ntBASIC0.55□□□□□ -2.32
ACTN1P12814 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
ACTN1P12814 RNU7-123P-201ENST00000515911 60 ntBASIC0.54□□□□□ -2.32
ACTN1P12814 Y_RNA.778-201ENST00000620203 90 ntBASIC0.54□□□□□ -2.32
ACTN1P12814 Y_RNA.270-201ENST00000364693 104 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 SNORA50A-201ENST00000384225 134 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 MIR644A-201ENST00000385262 94 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 SNORA25.12-201ENST00000516202 82 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 SNORD67.1-201ENST00000516618 108 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 SNORA62.5-201ENST00000516634 120 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 MTND5P34-201ENST00000568888 325 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 MIR3678-201ENST00000578455 94 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 AC105081.1-201ENST00000617727 106 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms