Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 SNORA2B-201ENST00000384583 137 ntBASIC2.08□□□□□ -2.08
SRFP11831 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SRFP11831 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.08□□□□□ -2.08
SRFP11831 RNU6-1229P-201ENST00000364295 107 ntBASIC2.07□□□□□ -2.08
SRFP11831 MIR518E-201ENST00000385252 88 ntBASIC2.07□□□□□ -2.08
SRFP11831 RNU6-788P-201ENST00000390967 104 ntBASIC2.07□□□□□ -2.08
SRFP11831 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
SRFP11831 RNU7-41P-201ENST00000515917 61 ntBASIC2.07□□□□□ -2.08
SRFP11831 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
SRFP11831 AC133485.1-201ENST00000567176 124 ntBASIC2.07□□□□□ -2.08
SRFP11831 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.07□□□□□ -2.08
SRFP11831 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SRFP11831 RNY1P13-201ENST00000365030 105 ntBASIC2.06□□□□□ -2.08
SRFP11831 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
SRFP11831 MIR144-201ENST00000384886 86 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-447P-201ENST00000410293 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-1118P-201ENST00000410382 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-1076P-201ENST00000410397 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-355P-201ENST00000410427 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-791P-201ENST00000410467 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-705P-201ENST00000410601 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-1100P-201ENST00000410691 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-860P-201ENST00000410860 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-1217P-201ENST00000411276 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RNU6-785P-201ENST00000411324 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 SNORD111.1-201ENST00000516421 86 ntBASIC2.06□□□□□ -2.08
SRFP11831 AC140658.3-201ENST00000567603 271 ntBASIC2.06□□□□□ -2.08
SRFP11831 AC145423.2-201ENST00000610631 239 ntBASIC2.06□□□□□ -2.08
SRFP11831 U6.90-201ENST00000614007 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SRFP11831 U6.70-201ENST00000620287 104 ntBASIC2.06□□□□□ -2.08
SRFP11831 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SRFP11831 MIR378A-201ENST00000362177 66 ntBASIC2.05□□□□□ -2.08
SRFP11831 MIR337-201ENST00000362281 93 ntBASIC2.05□□□□□ -2.08
SRFP11831 AC023790.1-201ENST00000482174 347 ntBASIC2.05□□□□□ -2.08
SRFP11831 AC090897.1-201ENST00000580909 226 ntBASIC2.05□□□□□ -2.08
SRFP11831 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.05□□□□□ -2.08
SRFP11831 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SRFP11831 RNA5SP48-201ENST00000363969 126 ntBASIC2.04□□□□□ -2.08
SRFP11831 SNORA25.9-201ENST00000365087 128 ntBASIC2.04□□□□□ -2.08
SRFP11831 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SRFP11831 AL450471.1-201ENST00000447509 127 ntBASIC2.04□□□□□ -2.08
SRFP11831 AC009474.2-201ENST00000451383 136 ntBASIC2.04□□□□□ -2.08
SRFP11831 snoU13.18-201ENST00000459483 104 ntBASIC2.04□□□□□ -2.08
SRFP11831 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
SRFP11831 RNU6-922P-201ENST00000516753 99 ntBASIC2.04□□□□□ -2.08
SRFP11831 AL357312.1-201ENST00000603879 298 ntBASIC2.04□□□□□ -2.08
SRFP11831 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.04□□□□□ -2.08
SRFP11831 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SRFP11831 RNU6-129P-201ENST00000391022 107 ntBASIC2.03□□□□□ -2.08
SRFP11831 MIR1236-201ENST00000408340 102 ntBASIC2.03□□□□□ -2.08
SRFP11831 AC087499.7-201ENST00000441958 109 ntBASIC2.03□□□□□ -2.08
SRFP11831 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
SRFP11831 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
SRFP11831 SNORA25.13-201ENST00000516395 103 ntBASIC2.03□□□□□ -2.08
SRFP11831 AC141846.1-201ENST00000568348 142 ntBASIC2.03□□□□□ -2.08
SRFP11831 MIR4500-201ENST00000579472 76 ntBASIC2.03□□□□□ -2.08
SRFP11831 U7.4-201ENST00000614961 63 ntBASIC2.03□□□□□ -2.08
SRFP11831 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SRFP11831 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SRFP11831 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
SRFP11831 Y_RNA.57-201ENST00000362806 113 ntBASIC2.02□□□□□ -2.09
SRFP11831 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
SRFP11831 AL161935.2-201ENST00000414627 60 ntBASIC2.02□□□□□ -2.09
SRFP11831 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
SRFP11831 AL137847.3-201ENST00000611521 109 ntBASIC2.02□□□□□ -2.09
SRFP11831 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
SRFP11831 MIR8066-201ENST00000617280 78 ntBASIC2.02□□□□□ -2.09
SRFP11831 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SRFP11831 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SRFP11831 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SRFP11831 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SRFP11831 RNU6-478P-201ENST00000363904 110 ntBASIC2.01□□□□□ -2.09
SRFP11831 RNA5SP190-201ENST00000365222 118 ntBASIC2.01□□□□□ -2.09
SRFP11831 RNU4-83P-201ENST00000410863 133 ntBASIC2.01□□□□□ -2.09
SRFP11831 MIR4287-201ENST00000579398 78 ntBASIC2.01□□□□□ -2.09
SRFP11831 AL773524.1-201ENST00000614065 229 ntBASIC2.01□□□□□ -2.09
SRFP11831 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SRFP11831 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SRFP11831 WWP1P1-201ENST00000466609 2769 ntBASIC2□□□□□ -2.09
SRFP11831 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
SRFP11831 AC008163.1-202ENST00000636004 2889 ntBASIC2□□□□□ -2.09
SRFP11831 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
SRFP11831 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
SRFP11831 AP000753.3-201ENST00000604083 169 ntBASIC2□□□□□ -2.09
SRFP11831 Y_RNA.788-201ENST00000622394 112 ntBASIC2□□□□□ -2.09
SRFP11831 U6.109-201ENST00000636749 87 ntBASIC2□□□□□ -2.09
SRFP11831 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
SRFP11831 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
SRFP11831 Y_RNA.545-201ENST00000384652 105 ntBASIC1.99□□□□□ -2.09
SRFP11831 SNORD41-201ENST00000386967 70 ntBASIC1.99□□□□□ -2.09
SRFP11831 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SRFP11831 BX276092.1-201ENST00000427368 251 ntBASIC1.99□□□□□ -2.09
SRFP11831 SNORD4B-201ENST00000459083 72 ntBASIC1.99□□□□□ -2.09
SRFP11831 snoU13.11-201ENST00000459219 104 ntBASIC1.99□□□□□ -2.09
SRFP11831 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
SRFP11831 SNORA25.15-201ENST00000516487 89 ntBASIC1.99□□□□□ -2.09
SRFP11831 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.99□□□□□ -2.09
SRFP11831 AL662814.1-201ENST00000617364 121 ntBASIC1.99□□□□□ -2.09
SRFP11831 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms