Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
LCMT2O60294 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.29□□□□□ -2.36
LCMT2O60294 MIR924-201ENST00000638017 53 ntBASIC0.29□□□□□ -2.36
LCMT2O60294 Y_RNA.120-201ENST00000363304 110 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 SNORD118-201ENST00000363593 134 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 RNU6-818P-201ENST00000364837 108 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 SNORA32-201ENST00000384072 121 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 Y_RNA.497-201ENST00000384447 98 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 RNU6-588P-201ENST00000410281 105 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 Y_RNA.793-201ENST00000411222 111 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 AC107027.2-201ENST00000512197 115 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 RNU6-765P-201ENST00000516916 99 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 RNU7-35P-201ENST00000517174 62 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 RNU2-60P-201ENST00000517290 128 ntBASIC0.28□□□□□ -2.36
LCMT2O60294 Y_RNA.337-201ENST00000365312 102 ntBASIC0.27□□□□□ -2.37
LCMT2O60294 RNU6-291P-201ENST00000384720 107 ntBASIC0.27□□□□□ -2.37
LCMT2O60294 AL022718.1-201ENST00000412004 84 ntBASIC0.27□□□□□ -2.37
LCMT2O60294 RNU2-35P-201ENST00000516446 142 ntBASIC0.27□□□□□ -2.37
LCMT2O60294 RNA5SP33-201ENST00000516687 98 ntBASIC0.27□□□□□ -2.37
LCMT2O60294 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 SNORD115-2-201ENST00000362842 82 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 RNU6-508P-201ENST00000363231 103 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 Y_RNA.297-201ENST00000364950 91 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 SNORD115-20-201ENST00000365099 82 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 RNU6-690P-201ENST00000365242 106 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 Y_RNA.536-201ENST00000384621 113 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 SNORA75.5-201ENST00000391291 81 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 SNORD71-201ENST00000411292 86 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 Y_RNA.644-201ENST00000459006 113 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 Y_RNA.674-201ENST00000516362 113 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 AC022523.2-201ENST00000561045 150 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 MIR3658-201ENST00000636291 56 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 MIR6844-201ENST00000637122 62 ntBASIC0.26□□□□□ -2.37
LCMT2O60294 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
LCMT2O60294 Y_RNA.489-201ENST00000384410 101 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
LCMT2O60294 RNU6-240P-201ENST00000516098 97 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 RNU6-469P-201ENST00000516253 101 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 RNU6-531P-201ENST00000516694 104 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 Y_RNA.697-201ENST00000516776 113 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 MIR4305-201ENST00000583252 102 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 MIR548AE2-201ENST00000583456 67 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 AL359881.1-201ENST00000602916 267 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 AC078938.1-201ENST00000620993 318 ntBASIC0.25□□□□□ -2.37
LCMT2O60294 Y_RNA.366-201ENST00000365540 102 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 Y_RNA.531-201ENST00000384589 121 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 RNU6-535P-201ENST00000384722 107 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 RNU6-239P-201ENST00000390990 99 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 MIR1270-201ENST00000459320 83 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.24□□□□□ -2.37
LCMT2O60294 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.24□□□□□ -2.37
LCMT2O60294 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 AC141273.2-201ENST00000618989 130 ntBASIC0.24□□□□□ -2.37
LCMT2O60294 RNA5SP133-201ENST00000363368 119 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNU6-379P-201ENST00000363813 104 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNU4-84P-201ENST00000364200 139 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 Y_RNA.357-201ENST00000365487 109 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 MIR1197-201ENST00000408818 88 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 SUMO1P3-201ENST00000439961 304 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 Y_RNA.651-201ENST00000459380 103 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNU7-121P-201ENST00000516604 62 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 SNORD67.1-201ENST00000516618 108 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNU7-137P-201ENST00000516788 62 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNA5SP268-201ENST00000516828 124 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 RNA5SP330-201ENST00000517096 96 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 AC072026.1-201ENST00000605023 201 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 U6.109-201ENST00000636749 87 ntBASIC0.23□□□□□ -2.37
LCMT2O60294 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
LCMT2O60294 Y_RNA.115-201ENST00000363272 98 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 Y_RNA.174-201ENST00000363781 105 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 Y_RNA.258-201ENST00000364613 105 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 RNU6-716P-201ENST00000365621 103 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 RNU6-1271P-201ENST00000517049 105 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 DEFB131E-201ENST00000532329 154 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 AC138749.4-201ENST00000563970 127 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 AC138907.4-201ENST00000570107 226 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 AC011603.4-201ENST00000611325 277 ntBASIC0.22□□□□□ -2.37
LCMT2O60294 MIR330-201ENST00000362196 94 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 Y_RNA.188-201ENST00000363952 111 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 AC069271.1-201ENST00000445577 156 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 RNU6-388P-201ENST00000517012 105 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 RNU6-389P-201ENST00000517048 105 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 RNA5SP47-201ENST00000517230 109 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 AP002392.1-201ENST00000537692 208 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 MIR3646-201ENST00000578301 84 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 AC021443.1-201ENST00000604478 211 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 MIR7107-201ENST00000611489 80 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 AC105081.1-201ENST00000617727 106 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 MIR6828-201ENST00000636181 60 ntBASIC0.21□□□□□ -2.38
LCMT2O60294 SNORA63.5-201ENST00000363548 123 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 396.4 ms