Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL158209.2-201ENST00000619266 216 ntBASIC-1.9□□□□□ -2.71
COL6A5A8TX70 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 RNU6-938P-201ENST00000411285 103 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.91□□□□□ -2.72
COL6A5A8TX70 JPX_2.1-201ENST00000614161 69 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 RNU6-371P-201ENST00000364283 108 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 AL033528.1-201ENST00000453780 140 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 SNORA25.10-201ENST00000515926 124 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.91□□□□□ -2.72
COL6A5A8TX70 AC174048.1-201ENST00000603389 144 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 C8orf59P2-201ENST00000603441 271 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 AC072039.2-201ENST00000608883 439 ntBASIC-1.91□□□□□ -2.72
COL6A5A8TX70 MIR494-201ENST00000349529 81 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 RNU6-170P-201ENST00000362832 104 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 RNA5SP224-201ENST00000365069 126 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 SNORD90-201ENST00000391145 111 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 AL353193.1-201ENST00000421444 268 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 RNU7-45P-201ENST00000459460 63 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 DEFB108A-201ENST00000530110 222 ntBASIC-1.92□□□□□ -2.72
COL6A5A8TX70 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.92□□□□□ -2.72
COL6A5A8TX70 SNORA33.1-201ENST00000364957 130 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 MTND3P1-201ENST00000441336 220 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 MTND2P31-201ENST00000512602 616 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 RNU6-64P-201ENST00000517119 105 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 AC138915.2-201ENST00000569776 97 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 AL021921.1-201ENST00000442774 93 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 MTND1P5-201ENST00000517906 940 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 AL021707.8-201ENST00000609428 183 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 AP000720.1-201ENST00000625091 483 ntBASIC-1.93□□□□□ -2.72
COL6A5A8TX70 SNORD114-10-201ENST00000363409 72 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 SNORA53-201ENST00000391141 249 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 AC024067.1-201ENST00000426199 223 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 snoU13.6-201ENST00000458785 104 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 RNU6-590P-201ENST00000365039 107 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 SNORA72-201ENST00000384339 132 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 SNORD72-201ENST00000390994 80 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 AC133794.1-201ENST00000602731 914 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 AC092747.3-201ENST00000603769 301 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 MIR4426-201ENST00000640330 63 ntBASIC-1.94□□□□□ -2.72
COL6A5A8TX70 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 RNU6-495P-201ENST00000362995 107 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 SNORD70.1-201ENST00000391007 85 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 RNU6-757P-201ENST00000410334 100 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.95□□□□□ -2.72
COL6A5A8TX70 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.95□□□□□ -2.72
COL6A5A8TX70 AC007494.3-201ENST00000624660 743 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 SNORD115-38-201ENST00000365037 82 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 RNU6-456P-201ENST00000384493 107 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.95□□□□□ -2.72
COL6A5A8TX70 AC137499.1-201ENST00000427602 88 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 AC005828.6-201ENST00000606610 232 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 AC048344.4-201ENST00000619744 527 ntBASIC-1.95□□□□□ -2.72
COL6A5A8TX70 RNU6-874P-201ENST00000362390 105 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU6-792P-201ENST00000363490 107 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU2-38P-201ENST00000410856 79 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 SEPT14P8-201ENST00000508026 178 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU6-807P-201ENST00000516805 107 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU6-254P-201ENST00000363377 107 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU6-946P-201ENST00000383878 107 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 MIR516A2-201ENST00000384888 90 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 MIR516A1-201ENST00000385033 90 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU7-35P-201ENST00000517174 62 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 MIR1322-201ENST00000638013 71 ntBASIC-1.96□□□□□ -2.72
COL6A5A8TX70 RNU6-235P-201ENST00000362644 107 ntBASIC-1.97□□□□□ -2.72
COL6A5A8TX70 MIR548AA1-201ENST00000384971 97 ntBASIC-1.97□□□□□ -2.72
COL6A5A8TX70 MTND3P16-201ENST00000452205 344 ntBASIC-1.97□□□□□ -2.72
COL6A5A8TX70 RNU7-106P-201ENST00000459514 67 ntBASIC-1.97□□□□□ -2.72
COL6A5A8TX70 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.97□□□□□ -2.72
COL6A5A8TX70 AC107905.1-201ENST00000616204 426 ntBASIC-1.97□□□□□ -2.72
COL6A5A8TX70 RNU6-664P-201ENST00000362381 107 ntBASIC-1.97□□□□□ -2.73
COL6A5A8TX70 SNORD101-201ENST00000384027 73 ntBASIC-1.97□□□□□ -2.73
COL6A5A8TX70 RNU7-136P-201ENST00000458819 69 ntBASIC-1.97□□□□□ -2.73
COL6A5A8TX70 SNORA25.14-201ENST00000516481 132 ntBASIC-1.97□□□□□ -2.73
COL6A5A8TX70 AC008507.4-201ENST00000585464 127 ntBASIC-1.97□□□□□ -2.73
COL6A5A8TX70 SNORA17.4-201ENST00000391287 132 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 RNU7-24P-201ENST00000458867 62 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 AC024933.1-201ENST00000608472 348 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 RNU6-669P-201ENST00000365575 107 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 RNU6-318P-201ENST00000384283 103 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 SNORA20-201ENST00000384662 132 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.98□□□□□ -2.73
COL6A5A8TX70 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.99□□□□□ -2.73
COL6A5A8TX70 AL606534.2-204ENST00000635008 178 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 SNORD114-7-201ENST00000362520 77 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 RNU6-260P-201ENST00000384092 107 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 MIR451A-201ENST00000385059 72 ntBASIC-1.99□□□□□ -2.73
COL6A5A8TX70 MIR545-201ENST00000385085 106 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms