Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.191-201ENST00000363972 113 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.294-201ENST00000364916 102 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-934P-201ENST00000365154 107 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.346-201ENST00000365385 112 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 SNORA18-201ENST00000384416 132 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU4-69P-201ENST00000410677 143 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 COX6CP6-201ENST00000490840 228 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-971P-201ENST00000516920 106 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 AL662814.1-201ENST00000617364 121 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR6740-201ENST00000618268 113 ntBASIC1.27□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.26□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR4452-201ENST00000583004 71 ntBASIC1.26□□□□□ -2.21
PCDHGA3Q9Y5H0 SNORA4-201ENST00000584302 138 ntBASIC1.26□□□□□ -2.21
PCDHGA3Q9Y5H0 AC132825.6-201ENST00000638861 357 ntBASIC1.26□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR1-1-201ENST00000362147 71 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 SNORD77B-201ENST00000391112 67 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 snoU13.18-201ENST00000459483 104 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-1061P-201ENST00000516530 99 ntBASIC1.25□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-959P-201ENST00000384671 107 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR1263-201ENST00000408324 86 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 U7.7-201ENST00000459276 60 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU7-35P-201ENST00000517174 62 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 AC141846.1-201ENST00000568348 142 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR3910-1-201ENST00000580936 111 ntBASIC1.24□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 RPS26P5-201ENST00000418544 335 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU7-79P-201ENST00000516082 62 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR3163-201ENST00000581592 73 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 AC025627.3-201ENST00000582078 182 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 AC025166.1-201ENST00000612411 163 ntBASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR30D-201ENST00000362283 70 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 SNORD58C-201ENST00000365223 64 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.528-201ENST00000384575 108 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 MIR489-201ENST00000384923 84 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 IGKV1-22-201ENST00000524313 326 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 RNU6-94P-201ENST00000607728 107 ntBASIC1.22□□□□□ -2.21
PCDHGA3Q9Y5H0 Y_RNA.71-201ENST00000362892 104 ntBASIC1.21□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-949P-201ENST00000384040 107 ntBASIC1.21□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-342P-201ENST00000384521 104 ntBASIC1.21□□□□□ -2.22
PCDHGA3Q9Y5H0 AC008267.6-201ENST00000441664 139 ntBASIC1.21□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-62P-201ENST00000516526 102 ntBASIC1.21□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR548AE2-201ENST00000583456 67 ntBASIC1.21□□□□□ -2.22
PCDHGA3Q9Y5H0 AL157777.2-201ENST00000258070 137 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD116-14-201ENST00000383894 92 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD116-17-201ENST00000383929 92 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD116-15-201ENST00000384445 92 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-1117P-201ENST00000384525 104 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD116-19-201ENST00000384729 92 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR100-201ENST00000385259 80 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 MIRLET7F2-201ENST00000385277 83 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR1827-201ENST00000408549 66 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU4-61P-201ENST00000411243 107 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 Y_RNA.712-201ENST00000517011 92 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
PCDHGA3Q9Y5H0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 RNY4P6-201ENST00000363667 96 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR1257-201ENST00000408490 117 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-772P-201ENST00000516042 105 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR4771-2-201ENST00000577758 74 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 MIR4771-1-201ENST00000582617 74 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 U6.95-201ENST00000636931 70 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
PCDHGA3Q9Y5H0 AC023934.1-201ENST00000574529 2389 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD114-10-201ENST00000363409 72 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNY1P13-201ENST00000365030 105 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-447P-201ENST00000410293 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-355P-201ENST00000410427 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-791P-201ENST00000410467 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-705P-201ENST00000410601 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-860P-201ENST00000410860 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-785P-201ENST00000411324 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU7-185P-201ENST00000459215 60 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 SNORD124-201ENST00000459577 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 RNU6-781P-201ENST00000516377 101 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 U6.90-201ENST00000614007 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 U6.70-201ENST00000620287 104 ntBASIC1.18□□□□□ -2.22
PCDHGA3Q9Y5H0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms