Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 Y_RNA.52-201ENST00000362760 96 ntBASIC0.2□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-291P-201ENST00000384720 107 ntBASIC0.2□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP144-201ENST00000410846 116 ntBASIC0.2□□□□□ -2.38
POLR2J3Q9H1A7 RNU7-70P-201ENST00000516941 66 ntBASIC0.2□□□□□ -2.38
POLR2J3Q9H1A7 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.75-201ENST00000362927 97 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNY1-201ENST00000364228 113 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-1082P-201ENST00000364574 107 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-47P-201ENST00000383866 107 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU4-70P-201ENST00000384579 139 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-768P-201ENST00000384683 107 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-1086P-201ENST00000410930 100 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 AL512326.2-201ENST00000426359 151 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU7-79P-201ENST00000516082 62 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-765P-201ENST00000516916 99 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNU7-35P-201ENST00000517174 62 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 AC062037.2-201ENST00000610137 73 ntBASIC0.19□□□□□ -2.38
POLR2J3Q9H1A7 RNY1P6-201ENST00000384193 109 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.556-201ENST00000384677 113 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 MIR499A-201ENST00000384903 122 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 RNU5E-9P-201ENST00000411164 104 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP247-201ENST00000411181 105 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 RPL39P25-201ENST00000449384 154 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 MIR7107-201ENST00000611489 80 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP245-201ENST00000364239 121 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 SNORA25.7-201ENST00000364375 127 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 SNORA72.6-201ENST00000384520 129 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 MIR936-201ENST00000401264 98 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 SNORD71-201ENST00000411292 86 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-1023P-201ENST00000516137 106 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP268-201ENST00000516828 124 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 MIR4503-201ENST00000582187 83 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 MIR3149-201ENST00000584629 83 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 MIR6755-201ENST00000619993 66 ntBASIC0.17□□□□□ -2.38
POLR2J3Q9H1A7 SNORD115-2-201ENST00000362842 82 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 RNY1P11-201ENST00000363759 113 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 SNORD115-20-201ENST00000365099 82 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-574P-201ENST00000384265 107 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.478-201ENST00000384358 107 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 SUMO1P3-201ENST00000439961 304 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 AC069271.1-201ENST00000445577 156 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 MIR1270-201ENST00000459320 83 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 RNU4-71P-201ENST00000516258 113 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP47-201ENST00000517230 109 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 RNU2-60P-201ENST00000517290 128 ntBASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.193-201ENST00000363979 102 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.307-201ENST00000365022 117 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.435-201ENST00000384095 112 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 SNORD28-201ENST00000384706 75 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 RNA5SP193-201ENST00000410353 107 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 AL118496.2-201ENST00000448300 230 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 RNU2-35P-201ENST00000516446 142 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-531P-201ENST00000516694 104 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 AL359881.1-201ENST00000602916 267 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.15□□□□□ -2.39
POLR2J3Q9H1A7 MIR411-201ENST00000362239 96 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.162-201ENST00000363683 102 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.393-201ENST00000383936 102 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.521-201ENST00000384560 114 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-535P-201ENST00000384722 107 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-1219P-201ENST00000516143 112 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-1045P-201ENST00000516321 107 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 AC022559.1-201ENST00000520905 205 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 U4.1-201ENST00000620349 87 ntBASIC0.14□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-508P-201ENST00000363231 103 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 SNORA63.5-201ENST00000363548 123 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 SNORA32-201ENST00000384072 121 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-187P-201ENST00000384139 106 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 MIR1302-3-201ENST00000408128 138 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 MTND3P2-201ENST00000438452 342 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-893P-201ENST00000458841 100 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNU7-113P-201ENST00000459273 62 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNU6-469P-201ENST00000516253 101 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNA5SP33-201ENST00000516687 98 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 AC138749.4-201ENST00000563970 127 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 MIR548AE2-201ENST00000583456 67 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.13□□□□□ -2.39
POLR2J3Q9H1A7 RNA5SP133-201ENST00000363368 119 ntBASIC0.12□□□□□ -2.39
POLR2J3Q9H1A7 SNORA20.1-201ENST00000364790 130 ntBASIC0.12□□□□□ -2.39
POLR2J3Q9H1A7 Y_RNA.497-201ENST00000384447 98 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 330.9 ms