Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 U7.6-201ENST00000610841 64 ntBASIC-0.24□□□□□ -2.45
SHANK3Q9BYB0 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.24□□□□□ -2.45
SHANK3Q9BYB0 AC112487.2-201ENST00000637950 304 ntBASIC-0.24□□□□□ -2.45
SHANK3Q9BYB0 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RNU6-509P-201ENST00000363519 107 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RNU6-770P-201ENST00000363929 105 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RBMX2P4-201ENST00000441256 376 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 SNORD4A-201ENST00000459174 72 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 SERF1AP1-201ENST00000514575 187 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RNU6-180P-201ENST00000516697 61 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 MIR499B-201ENST00000636498 73 ntBASIC-0.25□□□□□ -2.45
SHANK3Q9BYB0 RNU4-10P-201ENST00000364383 140 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 RNU6-929P-201ENST00000384429 107 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 RNU7-129P-201ENST00000516128 62 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 AL365205.2-201ENST00000594586 68 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 AL133255.1-201ENST00000606374 441 ntBASIC-0.26□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 RNU6-702P-201ENST00000364982 107 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 MIR1252-201ENST00000408861 65 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 RNU7-79P-201ENST00000516082 62 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 SNORA25.1-201ENST00000362326 128 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 RNU6-102P-201ENST00000384485 104 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 SNORA72.6-201ENST00000384520 129 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 MIR106A-201ENST00000384870 81 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 AL606845.1-201ENST00000404881 255 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 MIR548L-201ENST00000408303 86 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 MTND5P20-201ENST00000448677 143 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 RNU7-35P-201ENST00000517174 62 ntBASIC-0.27□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 RNA5SP205-201ENST00000364653 136 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 RNU6-211P-201ENST00000384047 107 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 RNU6-187P-201ENST00000384139 106 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 RNU6-121P-201ENST00000410525 99 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 DEFB131E-201ENST00000532329 154 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 AC021613.1-201ENST00000623880 111 ntBASIC-0.28□□□□□ -2.45
SHANK3Q9BYB0 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 RNU6-597P-201ENST00000365620 102 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 RNU6-662P-201ENST00000384253 104 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 SNORA18-201ENST00000384416 132 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 RNU6-429P-201ENST00000384582 108 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 SUMO1P3-201ENST00000439961 304 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 SNORA25.16-201ENST00000516741 121 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 RNU2-60P-201ENST00000517290 128 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 CR383656.4-201ENST00000546909 122 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 AC138749.4-201ENST00000563970 127 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 MIR3129-201ENST00000581095 76 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 MIR5197-201ENST00000583721 112 ntBASIC-0.29□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 MIR616-201ENST00000385293 97 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNA5SP163-201ENST00000410304 99 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RPL21P38-201ENST00000418090 167 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 ELOCP20-201ENST00000422460 345 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 AC244505.6-201ENST00000452829 130 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU7-45P-201ENST00000459460 63 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 MTND3P22-201ENST00000510932 243 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU6-453P-201ENST00000516819 85 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 SNORA40.15-201ENST00000516884 107 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU1-29P-201ENST00000606574 126 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU7-10P-201ENST00000607194 63 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 SNORD42.2-201ENST00000365570 69 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU6-291P-201ENST00000384720 107 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 RNU6-531P-201ENST00000516694 104 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.3□□□□□ -2.46
SHANK3Q9BYB0 SNORA22.1-201ENST00000362701 134 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 RNU6-161P-201ENST00000363051 106 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 RNA5SP133-201ENST00000363368 119 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 AC113618.1-201ENST00000416747 285 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 uc_338.28-201ENST00000612082 187 ntBASIC-0.31□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 MIR501-201ENST00000390204 84 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 RNU4-43P-201ENST00000410628 137 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 SNORD116-25-201ENST00000516517 92 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 MIR548H5-201ENST00000580314 60 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 MIR378D2-201ENST00000580636 98 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms