Protein–RNA interactions for Protein: Q9BW71

HIRIP3, HIRA-interacting protein 3, humanhuman

Predicted RBP Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3Q9BW71 RNU2-35P-201ENST00000516446 142 ntBASIC1.85□□□□□ -2.11
HIRIP3Q9BW71 RNU6-113P-201ENST00000516653 101 ntBASIC1.85□□□□□ -2.11
HIRIP3Q9BW71 AC007012.1-201ENST00000567192 175 ntBASIC1.85□□□□□ -2.11
HIRIP3Q9BW71 MIR3660-201ENST00000584845 100 ntBASIC1.85□□□□□ -2.11
HIRIP3Q9BW71 PVT1_3.1-201ENST00000620853 95 ntBASIC1.85□□□□□ -2.11
HIRIP3Q9BW71 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 MIR103A2-201ENST00000362154 78 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 RNU6-640P-201ENST00000363693 105 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 SNORD114-27-201ENST00000363766 70 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 RNU6-913P-201ENST00000390913 95 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 AC245047.7-201ENST00000440265 293 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 RNU6-537P-201ENST00000517277 103 ntBASIC1.84□□□□□ -2.11
HIRIP3Q9BW71 RNU1-93P-201ENST00000364704 169 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 RNU6-1107P-201ENST00000364817 104 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.348-201ENST00000365403 103 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.354-201ENST00000365448 111 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 MIR520E-201ENST00000384867 87 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 SNORA40.6-201ENST00000391153 128 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 RNU6-1054P-201ENST00000411293 104 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 COX6CP6-201ENST00000490840 228 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 MIR7974-201ENST00000615835 79 ntBASIC1.83□□□□□ -2.12
HIRIP3Q9BW71 RNA5SP264-201ENST00000363115 107 ntBASIC1.82□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.495-201ENST00000384435 112 ntBASIC1.82□□□□□ -2.12
HIRIP3Q9BW71 RNA5SP136-201ENST00000410906 107 ntBASIC1.82□□□□□ -2.12
HIRIP3Q9BW71 RPS29P1-201ENST00000465274 159 ntBASIC1.82□□□□□ -2.12
HIRIP3Q9BW71 RNU7-123P-201ENST00000515911 60 ntBASIC1.82□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.298-201ENST00000364960 107 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.328-201ENST00000365208 113 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.344-201ENST00000365381 112 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 SNORD12C-201ENST00000386307 89 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 MIR1270-201ENST00000459320 83 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 RNU7-45P-201ENST00000459460 63 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 RNU6-1258P-201ENST00000516911 111 ntBASIC1.81□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.198-201ENST00000364013 98 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 SNORA1.1-201ENST00000364671 133 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.362-201ENST00000365518 110 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 SNORA19.1-201ENST00000410656 129 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 HMGN1P33-201ENST00000432945 451 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 MIR5582-201ENST00000579697 68 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 RNU6-94P-201ENST00000607728 107 ntBASIC1.8□□□□□ -2.12
HIRIP3Q9BW71 MIR26B-201ENST00000362251 77 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 SNORA25.8-201ENST00000364831 128 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.309-201ENST00000365046 111 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 Y_RNA.323-201ENST00000365157 109 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 RNU6-910P-201ENST00000390844 107 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 RNU6-1190P-201ENST00000410811 104 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 AL020996.3-201ENST00000606617 222 ntBASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
HIRIP3Q9BW71 RNU4-16P-201ENST00000364737 141 ntBASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 RNU6-1014P-201ENST00000383940 103 ntBASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 RNY1P6-201ENST00000384193 109 ntBASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 MIR758-201ENST00000390227 88 ntBASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 RNA5SP261-201ENST00000410536 106 ntBASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 MIR3152-201ENST00000579801 74 ntBASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HIRIP3Q9BW71 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.13
HIRIP3Q9BW71 Y_RNA.36-201ENST00000362602 112 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 Y_RNA.163-201ENST00000363702 113 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 Y_RNA.330-201ENST00000365230 109 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 RNU6-690P-201ENST00000365242 106 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 RNU6-396P-201ENST00000365369 105 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 RNU6-342P-201ENST00000384521 104 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 MIR222-201ENST00000384992 110 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 MIR1185-1-201ENST00000408598 86 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 POLR2J4-204ENST00000418424 324 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 AL353813.1-201ENST00000440700 253 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 AL031737.1-201ENST00000450125 223 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 SNORA70.22-201ENST00000517160 124 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 AC019288.1-201ENST00000557918 224 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 PRELID3BP2-201ENST00000605362 201 ntBASIC1.77□□□□□ -2.13
HIRIP3Q9BW71 RNA5SP327-201ENST00000362494 101 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 SNORA63.5-201ENST00000363548 123 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 U8.6-201ENST00000364939 135 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 MIR488-201ENST00000365739 83 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 SNORA26.6-201ENST00000391256 115 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 AL512326.2-201ENST00000426359 151 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 RNU6-109P-201ENST00000516364 107 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 RNU6-184P-201ENST00000516514 107 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 RNU6-1223P-201ENST00000517124 104 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 AP003716.2-201ENST00000528260 108 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 MIR4305-201ENST00000583252 102 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 AC021443.1-201ENST00000604478 211 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 MIR8055-201ENST00000610739 97 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 AP001318.4-201ENST00000616637 121 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 AC087741.2-201ENST00000619415 172 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 AC021613.1-201ENST00000623880 111 ntBASIC1.76□□□□□ -2.13
HIRIP3Q9BW71 RNU6-766P-201ENST00000362478 107 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNU6-32P-201ENST00000383948 107 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNU6-13P-201ENST00000384248 107 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNU6-49P-201ENST00000384256 107 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNU6-12P-201ENST00000384604 107 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNU6-41P-201ENST00000384741 107 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 MIR598-201ENST00000384868 97 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 MIR1302-7-201ENST00000408841 72 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNA5SP144-201ENST00000410846 116 ntBASIC1.75□□□□□ -2.13
HIRIP3Q9BW71 RNU7-164P-201ENST00000459221 62 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms