Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 Y_RNA.447-201ENST00000384184 113 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 RNU4-70P-201ENST00000384579 139 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1045P-201ENST00000516321 107 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 MIR4431-201ENST00000579990 94 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1082P-201ENST00000364574 107 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU4-16P-201ENST00000364737 141 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU6-47P-201ENST00000383866 107 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNY1P6-201ENST00000384193 109 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 SNORA20-201ENST00000384662 132 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 MIR644A-201ENST00000385262 94 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 MTND3P2-201ENST00000438452 342 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 SNORA31.14-201ENST00000516728 116 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 RNU7-35P-201ENST00000517174 62 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 U4.1-201ENST00000620349 87 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 MIR6828-201ENST00000636181 60 ntBASIC0.22□□□□□ -2.37
HDHD3Q9BSH5 SNORA25.7-201ENST00000364375 127 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.307-201ENST00000365022 117 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 RNU6-42P-201ENST00000384165 107 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 RNU6-768P-201ENST00000384683 107 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 RNA5SP247-201ENST00000411181 105 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 RNU2-60P-201ENST00000517290 128 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 AC243829.6-201ENST00000612652 106 ntBASIC0.21□□□□□ -2.38
HDHD3Q9BSH5 MIR411-201ENST00000362239 96 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.366-201ENST00000365540 102 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.393-201ENST00000383936 102 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.452-201ENST00000384202 108 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 MIR1302-3-201ENST00000408128 138 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 AL118496.2-201ENST00000448300 230 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 RNU6-893P-201ENST00000458841 100 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 MIR1270-201ENST00000459320 83 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 SNORA25.16-201ENST00000516741 121 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 MIR4719-201ENST00000585233 84 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 AC009779.6-201ENST00000603972 165 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 MIR6513-201ENST00000621188 64 ntBASIC0.2□□□□□ -2.38
HDHD3Q9BSH5 RNU6-403P-201ENST00000363163 104 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.120-201ENST00000363304 110 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 RNU7-79P-201ENST00000516082 62 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 RNU7-70P-201ENST00000516941 66 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 RNA5SP47-201ENST00000517230 109 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 MTND5P34-201ENST00000568888 325 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 AC099654.10-201ENST00000640395 161 ntBASIC0.19□□□□□ -2.38
HDHD3Q9BSH5 RNY1P11-201ENST00000363759 113 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 RNU6-312P-201ENST00000364629 107 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 RNU6-574P-201ENST00000384265 107 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.536-201ENST00000384621 113 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 RNU6-1219P-201ENST00000516143 112 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 RNU2-35P-201ENST00000516446 142 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 AL589743.1-201ENST00000551932 2712 ntBASIC0.18□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.200-201ENST00000364018 102 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 RNA5SP245-201ENST00000364239 121 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 SNORA20.1-201ENST00000364790 130 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 RNU6-702P-201ENST00000364982 107 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.357-201ENST00000365487 109 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.497-201ENST00000384447 98 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 RNU7-121P-201ENST00000516604 62 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 AC130289.1-201ENST00000577321 73 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 MIR4711-201ENST00000578274 70 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 AL359881.1-201ENST00000602916 267 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 MIR7107-201ENST00000611489 80 ntBASIC0.17□□□□□ -2.38
HDHD3Q9BSH5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.83-201ENST00000363005 113 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.233-201ENST00000364407 101 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.515-201ENST00000384535 112 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 SNORD28-201ENST00000384706 75 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 RNA5SP193-201ENST00000410353 107 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 RNA5SP268-201ENST00000516828 124 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 MIR6755-201ENST00000619993 66 ntBASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.16□□□□□ -2.38
HDHD3Q9BSH5 Y_RNA.274-201ENST00000364714 101 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 RNU6-196P-201ENST00000384315 107 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.521-201ENST00000384560 114 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms