Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-1307P-201ENST00000391012 103 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1275P-201ENST00000391087 107 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AC009474.2-201ENST00000451383 136 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AC022137.1-201ENST00000483735 151 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.190-201ENST00000363964 101 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1237P-201ENST00000384777 107 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 SNORD41-201ENST00000386967 70 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 MIR1289-2-201ENST00000408360 111 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 MIR548G-201ENST00000408442 89 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-90P-201ENST00000606352 106 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1163P-201ENST00000364516 107 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 SNORD78.1-201ENST00000390866 65 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 snoU13.9-201ENST00000458927 103 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-922P-201ENST00000516753 99 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC141846.1-201ENST00000568348 142 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-86P-201ENST00000606534 107 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC103810.7-201ENST00000607821 91 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC105081.1-201ENST00000617727 106 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AP001362.1-201ENST00000625165 124 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 MIR3202-2-201ENST00000635980 79 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNY1P13-201ENST00000365030 105 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-402P-201ENST00000410678 103 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 SPINT5P-201ENST00000448174 155 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-638P-201ENST00000516582 104 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 AC133485.1-201ENST00000567176 124 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 AL662814.1-201ENST00000617364 121 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.567-201ENST00000384736 106 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 AC027119.1-201ENST00000440877 241 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 HSPE1P24-201ENST00000450782 238 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 snoU13.23-201ENST00000458863 104 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1244P-201ENST00000363614 108 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RPL39P39-201ENST00000455840 151 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 MIR4668-201ENST00000582284 70 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 MIR302D-201ENST00000362275 68 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-396P-201ENST00000365369 105 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 snoU13.2-201ENST00000459201 104 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 MTND5P40-201ENST00000559945 246 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 SEPT14P17-201ENST00000617978 177 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-219P-201ENST00000364728 107 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1276P-201ENST00000365372 104 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-949P-201ENST00000384040 107 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 Y_RNA.620-201ENST00000411009 88 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 AC015712.3-201ENST00000559380 164 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 Y_RNA.73-201ENST00000362910 113 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1125P-201ENST00000363601 107 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-497P-201ENST00000365316 104 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-480P-201ENST00000384332 107 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1065P-201ENST00000384513 106 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RPL30P7-201ENST00000479312 323 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 MIR4264-201ENST00000583520 66 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 MIR3192-201ENST00000584920 77 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AP000753.3-201ENST00000604083 169 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AL096861.1-201ENST00000610899 123 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AC012676.2-201ENST00000619258 186 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 RNY1P2-201ENST00000364820 117 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms