Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-1307P-201ENST00000391012 103 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1275P-201ENST00000391087 107 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AC009474.2-201ENST00000451383 136 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AC022137.1-201ENST00000483735 151 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.190-201ENST00000363964 101 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1237P-201ENST00000384777 107 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 SNORD41-201ENST00000386967 70 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 MIR1289-2-201ENST00000408360 111 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 MIR548G-201ENST00000408442 89 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-90P-201ENST00000606352 106 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1163P-201ENST00000364516 107 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 SNORD78.1-201ENST00000390866 65 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 snoU13.9-201ENST00000458927 103 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-922P-201ENST00000516753 99 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC141846.1-201ENST00000568348 142 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-86P-201ENST00000606534 107 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC103810.7-201ENST00000607821 91 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AC105081.1-201ENST00000617727 106 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AP001362.1-201ENST00000625165 124 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 MIR3202-2-201ENST00000635980 79 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
TRIM56Q9BRZ2 RNY1P13-201ENST00000365030 105 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-402P-201ENST00000410678 103 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 SPINT5P-201ENST00000448174 155 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-638P-201ENST00000516582 104 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 AC133485.1-201ENST00000567176 124 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 AL662814.1-201ENST00000617364 121 ntBASIC2.17□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.567-201ENST00000384736 106 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 AC027119.1-201ENST00000440877 241 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 HSPE1P24-201ENST00000450782 238 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 snoU13.23-201ENST00000458863 104 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.16□□□□□ -2.06
TRIM56Q9BRZ2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1244P-201ENST00000363614 108 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RPL39P39-201ENST00000455840 151 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 MIR4668-201ENST00000582284 70 ntBASIC2.15□□□□□ -2.07
TRIM56Q9BRZ2 MIR302D-201ENST00000362275 68 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-396P-201ENST00000365369 105 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 snoU13.2-201ENST00000459201 104 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 MTND5P40-201ENST00000559945 246 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 SEPT14P17-201ENST00000617978 177 ntBASIC2.14□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-219P-201ENST00000364728 107 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1276P-201ENST00000365372 104 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-949P-201ENST00000384040 107 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 Y_RNA.620-201ENST00000411009 88 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 AC015712.3-201ENST00000559380 164 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM56Q9BRZ2 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 Y_RNA.73-201ENST00000362910 113 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1125P-201ENST00000363601 107 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-497P-201ENST00000365316 104 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-480P-201ENST00000384332 107 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1065P-201ENST00000384513 106 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RPL30P7-201ENST00000479312 323 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 MIR4264-201ENST00000583520 66 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 MIR3192-201ENST00000584920 77 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AP000753.3-201ENST00000604083 169 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AL096861.1-201ENST00000610899 123 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AC012676.2-201ENST00000619258 186 ntBASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM56Q9BRZ2 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 RNY1P2-201ENST00000364820 117 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 261.5 ms