Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNU6-75P-201ENST00000515944 104 ntBASIC2.87□□□□□ -1.95
SCUBE3Q8IX30 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
SCUBE3Q8IX30 RNU6-303P-201ENST00000517091 106 ntBASIC2.87□□□□□ -1.95
SCUBE3Q8IX30 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.87□□□□□ -1.95
SCUBE3Q8IX30 AC121758.2-201ENST00000553271 193 ntBASIC2.87□□□□□ -1.95
SCUBE3Q8IX30 RNU6-208P-201ENST00000362431 107 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 Y_RNA.283-201ENST00000364798 112 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 RNU6-132P-201ENST00000383863 107 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 MIR563-201ENST00000385080 79 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 RNA5SP492-201ENST00000411330 114 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 AC015818.7-201ENST00000428754 109 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 SNORA4-201ENST00000584302 138 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 SNORD92-201ENST00000585078 85 ntBASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCUBE3Q8IX30 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCUBE3Q8IX30 Y_RNA.386-201ENST00000383913 105 ntBASIC2.85□□□□□ -1.95
SCUBE3Q8IX30 MIR196B-201ENST00000384852 84 ntBASIC2.85□□□□□ -1.95
SCUBE3Q8IX30 RNU6-587P-201ENST00000391282 106 ntBASIC2.85□□□□□ -1.95
SCUBE3Q8IX30 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
SCUBE3Q8IX30 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.85□□□□□ -1.95
SCUBE3Q8IX30 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 RNA5SP100-201ENST00000410903 110 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 RNA5SP59-201ENST00000410922 110 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 AC074348.1-201ENST00000426503 132 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 AL513328.1-201ENST00000446460 224 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 AC245517.4-201ENST00000448601 281 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 DEFB122-202ENST00000569013 197 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.84□□□□□ -1.95
SCUBE3Q8IX30 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.96
SCUBE3Q8IX30 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 RNA5SP48-201ENST00000363969 126 ntBASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 SNORD30.1-201ENST00000391309 70 ntBASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 MIR664A-201ENST00000626086 82 ntBASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 AL161722.3-201ENST00000605789 2983 ntBASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.83□□□□□ -1.96
SCUBE3Q8IX30 RNU6-203P-201ENST00000384038 104 ntBASIC2.82□□□□□ -1.96
SCUBE3Q8IX30 RNU6-540P-201ENST00000384622 101 ntBASIC2.82□□□□□ -1.96
SCUBE3Q8IX30 MIR9-1-201ENST00000385198 89 ntBASIC2.82□□□□□ -1.96
SCUBE3Q8IX30 RNU6-466P-201ENST00000391224 103 ntBASIC2.82□□□□□ -1.96
SCUBE3Q8IX30 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 Y_RNA.205-201ENST00000364128 113 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 RNU6-396P-201ENST00000365369 105 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 AC004965.1-201ENST00000413033 213 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 RNA5SP24-201ENST00000516478 95 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 YWHAEP2-201ENST00000580066 112 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 YWHAEP3-201ENST00000582767 121 ntBASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCUBE3Q8IX30 MIR30D-201ENST00000362283 70 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 Y_RNA.12-201ENST00000362393 112 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 RNU6-800P-201ENST00000384473 103 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 Y_RNA.596-201ENST00000410462 109 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 RNU7-106P-201ENST00000459514 67 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 AC008413.1-201ENST00000511864 177 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 SNORA31.17-201ENST00000516953 127 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 MIR4635-201ENST00000583759 79 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 MIR6740-201ENST00000618268 113 ntBASIC2.8□□□□□ -1.96
SCUBE3Q8IX30 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCUBE3Q8IX30 MIRLET7F1-201ENST00000362202 87 ntBASIC2.79□□□□□ -1.96
SCUBE3Q8IX30 MIR518E-201ENST00000385252 88 ntBASIC2.79□□□□□ -1.96
SCUBE3Q8IX30 snoU13.15-201ENST00000459407 104 ntBASIC2.79□□□□□ -1.96
SCUBE3Q8IX30 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SCUBE3Q8IX30 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCUBE3Q8IX30 MIR194-1-201ENST00000384892 85 ntBASIC2.78□□□□□ -1.96
SCUBE3Q8IX30 RNU6-1165P-201ENST00000410119 107 ntBASIC2.78□□□□□ -1.96
SCUBE3Q8IX30 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
SCUBE3Q8IX30 AP000942.3-201ENST00000603702 160 ntBASIC2.78□□□□□ -1.96
SCUBE3Q8IX30 MIR6733-201ENST00000635723 61 ntBASIC2.78□□□□□ -1.96
SCUBE3Q8IX30 U8.2-201ENST00000363156 134 ntBASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 SNORD53-201ENST00000579969 78 ntBASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 MIR4264-201ENST00000583520 66 ntBASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 U6.111-201ENST00000636093 83 ntBASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCUBE3Q8IX30 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 RNU6-957P-201ENST00000363652 99 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 SNORD56.5-201ENST00000364281 72 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 RNU6-1241P-201ENST00000384536 107 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 MIR154-201ENST00000385243 84 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 MIR1302-7-201ENST00000408841 72 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 HMGN2P35-201ENST00000412164 270 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 snoU13.23-201ENST00000458863 104 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 SNORD111.1-201ENST00000516421 86 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
SCUBE3Q8IX30 RNU6-859P-201ENST00000362728 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms