Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MIR1244-1-201ENST00000612829 85 ntBASIC-0.6□□□□□ -2.51
ABCA4P78363 AC072046.2-201ENST00000618366 268 ntBASIC-0.6□□□□□ -2.51
ABCA4P78363 AC048344.4-201ENST00000619744 527 ntBASIC-0.6□□□□□ -2.51
ABCA4P78363 MIR1244-3-201ENST00000635744 85 ntBASIC-0.6□□□□□ -2.51
ABCA4P78363 MIR1244-2-201ENST00000636449 85 ntBASIC-0.6□□□□□ -2.51
ABCA4P78363 MIR1244-4-202ENST00000636813 85 ntBASIC-0.6□□□□□ -2.51
ABCA4P78363 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-128P-201ENST00000383976 107 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR519A1-201ENST00000385257 85 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MT-TM-201ENST00000387377 68 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AL603914.1-201ENST00000401964 204 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-130P-201ENST00000411112 103 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AC022028.1-201ENST00000412054 408 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.61□□□□□ -2.51
ABCA4P78363 AC244090.1-201ENST00000441884 93 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AL009048.1-201ENST00000450437 298 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 SNORD42A-201ENST00000459584 64 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-118P-201ENST00000516552 102 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AC100767.1-201ENST00000528178 123 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR3682-201ENST00000581338 84 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR548AE2-201ENST00000583456 67 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
ABCA4P78363 AL021368.1-201ENST00000607490 540 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR6739-201ENST00000622461 75 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-82P-201ENST00000363970 107 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-880P-201ENST00000384526 107 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR517A-201ENST00000385001 87 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 SNORD37.1-201ENST00000390968 65 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RNU6-780P-201ENST00000391030 104 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AL078595.1-201ENST00000404458 226 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 snoU109.3-201ENST00000459477 145 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR548AG1-201ENST00000579932 66 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AC245884.10-201ENST00000597355 337 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 RN7SKP299-201ENST00000606679 301 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AL158211.2-201ENST00000607282 395 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AC087683.2-201ENST00000611384 326 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AL133173.2-201ENST00000614270 90 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 AC087741.2-201ENST00000619415 172 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR6888-201ENST00000621977 67 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR376A2-201ENST00000636782 80 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR6841-201ENST00000637129 72 ntBASIC-0.61□□□□□ -2.51
ABCA4P78363 MIR302B-201ENST00000362188 73 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU6-973P-201ENST00000364690 107 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 SNORA63.6-201ENST00000364921 119 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU6-524P-201ENST00000384270 107 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 SNORD115-47-201ENST00000391226 86 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AC113618.1-201ENST00000416747 285 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.62□□□□□ -2.51
ABCA4P78363 SNORA25.13-201ENST00000516395 103 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AC073114.1-201ENST00000612027 490 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU6-495P-201ENST00000362995 107 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU6-990P-201ENST00000364385 104 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU6-608P-201ENST00000383927 104 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 MIR1255B2-201ENST00000408618 67 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AC138393.2-201ENST00000414742 246 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.62□□□□□ -2.51
ABCA4P78363 AL160004.2-201ENST00000432935 350 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 RNU6-762P-201ENST00000517107 102 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.62□□□□□ -2.51
ABCA4P78363 AL512360.1-201ENST00000555346 234 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 MTATP6P24-201ENST00000576835 677 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 AC004467.1-201ENST00000615678 330 ntBASIC-0.62□□□□□ -2.51
ABCA4P78363 SNORD50.1-201ENST00000362987 71 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 SNORD81.1-201ENST00000363064 77 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-660P-201ENST00000364566 109 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MIR203A-201ENST00000384836 110 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MIR599-201ENST00000385069 95 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 SNORA53-201ENST00000391141 249 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-630P-201ENST00000391258 106 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MRPS35P2-201ENST00000508242 191 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU7-175P-201ENST00000515915 61 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-850P-201ENST00000516934 103 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms