Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNU6-32P-201ENST00000383948 107 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 RNU6-13P-201ENST00000384248 107 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 RNU6-12P-201ENST00000384604 107 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 RNU6-41P-201ENST00000384741 107 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 MIR605-201ENST00000385078 83 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 SNORD77B-201ENST00000391112 67 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 MIR1304-201ENST00000408243 91 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
ERVFC1-1P60608 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ERVFC1-1P60608 SNORD33-201ENST00000362761 85 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.360-201ENST00000365512 102 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.507-201ENST00000384500 99 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RNU6-1237P-201ENST00000384777 107 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 MIR590-201ENST00000385008 97 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RNU6-679P-201ENST00000391003 106 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RNU6-1307P-201ENST00000391012 103 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 SNORA67.5-201ENST00000391036 107 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RPL39P39-201ENST00000455840 151 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RPS29P23-201ENST00000458635 123 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 SNORD13-201ENST00000459299 104 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RNU7-79P-201ENST00000516082 62 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RNU6-904P-201ENST00000516206 101 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 MIR6516-201ENST00000630554 81 ntBASIC1.17□□□□□ -2.22
ERVFC1-1P60608 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
ERVFC1-1P60608 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ERVFC1-1P60608 RNA5SP264-201ENST00000363115 107 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.155-201ENST00000363632 101 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.348-201ENST00000365403 103 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 MIR206-201ENST00000384872 86 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 MIR577-201ENST00000385196 96 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 SNORA7.5-201ENST00000410672 110 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 RNU6-733P-201ENST00000410759 104 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 AL603825.1-201ENST00000438481 80 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 RPL30P7-201ENST00000479312 323 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.676-201ENST00000516393 96 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 SNORD67.1-201ENST00000516618 108 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 RNU6-521P-201ENST00000516663 105 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 SNORD53B-201ENST00000577887 78 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 MIR4422-201ENST00000581938 83 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 FAM71BP1-201ENST00000604431 523 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 MIR6740-201ENST00000618268 113 ntBASIC1.16□□□□□ -2.22
ERVFC1-1P60608 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
ERVFC1-1P60608 MIR378A-201ENST00000362177 66 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.78-201ENST00000362970 110 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-1099P-201ENST00000363533 107 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-654P-201ENST00000364373 107 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNY1P13-201ENST00000365030 105 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-409P-201ENST00000384114 104 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-1086P-201ENST00000410930 100 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 snoU13.2-201ENST00000459201 104 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-109P-201ENST00000516364 107 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 RNU6-184P-201ENST00000516514 107 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 AC141557.1-201ENST00000540982 400 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
ERVFC1-1P60608 MIR8081-201ENST00000611533 95 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 AP001318.4-201ENST00000616637 121 ntBASIC1.15□□□□□ -2.23
ERVFC1-1P60608 MIR103A2-201ENST00000362154 78 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 RNU6-640P-201ENST00000363693 105 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 SNORD115-35-201ENST00000365122 82 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 RNU6-396P-201ENST00000365369 105 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 RNU6-905P-201ENST00000384434 107 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 MIR563-201ENST00000385080 79 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 RNU6-205P-201ENST00000390858 107 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 RNU7-2P-201ENST00000516096 62 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.677-201ENST00000516401 85 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 RNU7-137P-201ENST00000516788 62 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 AC141846.1-201ENST00000568348 142 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 MIR4694-201ENST00000578534 80 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 BX248123.2-201ENST00000606318 124 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 AL662814.1-201ENST00000617364 121 ntBASIC1.14□□□□□ -2.23
ERVFC1-1P60608 MIR337-201ENST00000362281 93 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 RNY3P2-201ENST00000362918 102 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 RNU6-832P-201ENST00000363319 107 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 RNU6-1113P-201ENST00000384348 107 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 MIR588-201ENST00000384900 83 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 MT-TN-201ENST00000387400 73 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 RNA5SP95-201ENST00000410319 137 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 AC245517.4-201ENST00000448601 281 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 AC048334.1-201ENST00000477975 159 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 MIR2115-201ENST00000516657 100 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 RNU11-2P-201ENST00000516898 142 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 DEFB131E-201ENST00000532329 154 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.13□□□□□ -2.23
ERVFC1-1P60608 MIR4264-201ENST00000583520 66 ntBASIC1.13□□□□□ -2.23
ERVFC1-1P60608 MIR30D-201ENST00000362283 70 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 SNORD26-201ENST00000384147 75 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 RNU6-1201P-201ENST00000384227 107 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 RNU6-1321P-201ENST00000390905 107 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms