Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR1291-201ENST00000627649 87 ntBASIC2.36□□□□□ -2.03
EPHA4P54764 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
EPHA4P54764 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
EPHA4P54764 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
EPHA4P54764 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.35□□□□□ -2.03
EPHA4P54764 AC244023.1-201ENST00000426884 112 ntBASIC2.35□□□□□ -2.03
EPHA4P54764 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
EPHA4P54764 AC242498.1-201ENST00000604134 111 ntBASIC2.35□□□□□ -2.03
EPHA4P54764 AC006160.2-201ENST00000637708 154 ntBASIC2.35□□□□□ -2.03
EPHA4P54764 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
EPHA4P54764 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
EPHA4P54764 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 SNORD115-37-201ENST00000363768 82 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 Y_RNA.191-201ENST00000363972 113 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 SNORA70B-201ENST00000384210 135 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 MT-TN-201ENST00000387400 73 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 Y_RNA.607-201ENST00000410597 98 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 RNU6-250P-201ENST00000516958 103 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 MIR8066-201ENST00000617280 78 ntBASIC2.34□□□□□ -2.03
EPHA4P54764 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
EPHA4P54764 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
EPHA4P54764 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
EPHA4P54764 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
EPHA4P54764 SNORA25.3-201ENST00000363205 127 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 SNORA2B-201ENST00000384583 137 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 RNU6-519P-201ENST00000410590 108 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.33□□□□□ -2.04
EPHA4P54764 AL356320.1-201ENST00000429616 163 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 RN7SL274P-201ENST00000492268 272 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 AC090897.1-201ENST00000580909 226 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
EPHA4P54764 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
EPHA4P54764 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
EPHA4P54764 MT-TF-201ENST00000387314 71 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 RNU6-279P-201ENST00000391297 101 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 RNU6-1165P-201ENST00000410119 107 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 RNU7-62P-201ENST00000458856 62 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 RNU11-2P-201ENST00000516898 142 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 MIR4500-201ENST00000579472 76 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 MIR8063-201ENST00000621930 81 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 U6.109-201ENST00000636749 87 ntBASIC2.32□□□□□ -2.04
EPHA4P54764 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
EPHA4P54764 MIR519C-201ENST00000385053 87 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 MIR563-201ENST00000385080 79 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
EPHA4P54764 SNORA3.2-201ENST00000408221 125 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 SNORA44.1-201ENST00000517031 108 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 SNORA77B-201ENST00000578179 125 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 AP000942.3-201ENST00000603702 160 ntBASIC2.31□□□□□ -2.04
EPHA4P54764 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
EPHA4P54764 Y_RNA.57-201ENST00000362806 113 ntBASIC2.3□□□□□ -2.04
EPHA4P54764 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
EPHA4P54764 AL133373.1-201ENST00000497098 94 ntBASIC2.3□□□□□ -2.04
EPHA4P54764 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
EPHA4P54764 AC138749.4-201ENST00000563970 127 ntBASIC2.3□□□□□ -2.04
EPHA4P54764 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.3□□□□□ -2.04
EPHA4P54764 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.29□□□□□ -2.04
EPHA4P54764 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
EPHA4P54764 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
EPHA4P54764 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 SNORD33-201ENST00000362761 85 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 RNU6-53P-201ENST00000365367 106 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 RNU6-571P-201ENST00000384128 107 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 RNU6-205P-201ENST00000390858 107 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 RNU1-41P-201ENST00000516161 162 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 RNU1-48P-201ENST00000516400 162 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 MIR6740-201ENST00000618268 113 ntBASIC2.29□□□□□ -2.04
EPHA4P54764 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
EPHA4P54764 MIR377-201ENST00000362145 69 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 MIR103A2-201ENST00000362154 78 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 RNA5SP133-201ENST00000363368 119 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 Y_RNA.313-201ENST00000365095 103 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 RNU6-787P-201ENST00000384032 107 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 MIR1302-7-201ENST00000408841 72 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 Z98742.3-201ENST00000418637 326 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 SNRPGP12-201ENST00000449481 213 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 snoU13.9-201ENST00000458927 103 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 RNA5SP395-201ENST00000516567 118 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
EPHA4P54764 Y_RNA.244-201ENST00000364484 109 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 RNU6-24P-201ENST00000384440 107 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 RNU6-1065P-201ENST00000384513 106 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 RPL30P7-201ENST00000479312 323 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
EPHA4P54764 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
EPHA4P54764 MIR30D-201ENST00000362283 70 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 Y_RNA.119-201ENST00000363301 96 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 RNU6-652P-201ENST00000365488 107 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 RNU6-613P-201ENST00000410412 108 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 RN7SKP223-201ENST00000410582 62 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 AC093729.1-201ENST00000513074 128 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 RNU6-857P-201ENST00000515893 110 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 1786.8 ms