Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 HMGN2P35-201ENST00000412164 270 ntBASIC3.13□□□□□ -1.91
PRIM1P49642 AC010297.1-201ENST00000623948 149 ntBASIC3.13□□□□□ -1.91
PRIM1P49642 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.13□□□□□ -1.91
PRIM1P49642 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRIM1P49642 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRIM1P49642 RNU6-590P-201ENST00000365039 107 ntBASIC3.12□□□□□ -1.91
PRIM1P49642 SNORA40.18-201ENST00000391200 128 ntBASIC3.12□□□□□ -1.91
PRIM1P49642 SNORA31.15-201ENST00000516771 132 ntBASIC3.12□□□□□ -1.91
PRIM1P49642 MIR1291-201ENST00000627649 87 ntBASIC3.12□□□□□ -1.91
PRIM1P49642 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRIM1P49642 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRIM1P49642 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.11□□□□□ -1.91
PRIM1P49642 snoU13.2-201ENST00000459201 104 ntBASIC3.11□□□□□ -1.91
PRIM1P49642 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
PRIM1P49642 AC016717.2-201ENST00000609089 5141 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.1□□□□□ -1.91
PRIM1P49642 RNU4-32P-201ENST00000363404 141 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 RNA5SP100-201ENST00000410903 110 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 RNA5SP59-201ENST00000410922 110 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 AC020891.4-201ENST00000605745 93 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.1□□□□□ -1.91
PRIM1P49642 RNU6-686P-201ENST00000364839 107 ntBASIC3.09□□□□□ -1.91
PRIM1P49642 RPS27P21-201ENST00000486977 252 ntBASIC3.09□□□□□ -1.91
PRIM1P49642 FGF7P7-201ENST00000514120 227 ntBASIC3.09□□□□□ -1.91
PRIM1P49642 AC090897.1-201ENST00000580909 226 ntBASIC3.09□□□□□ -1.91
PRIM1P49642 AL096861.1-201ENST00000610899 123 ntBASIC3.09□□□□□ -1.91
PRIM1P49642 AC121758.2-201ENST00000553271 193 ntBASIC3.08□□□□□ -1.92
PRIM1P49642 MIR4529-201ENST00000578110 78 ntBASIC3.08□□□□□ -1.92
PRIM1P49642 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.08□□□□□ -1.92
PRIM1P49642 MIR6073-201ENST00000352083 89 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 SNORA72.6-201ENST00000384520 129 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 AC004965.1-201ENST00000413033 213 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 HMGN2P23-201ENST00000456759 269 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 AC114801.3-201ENST00000510231 177 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 RNU7-153P-201ENST00000516455 62 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 RNU6-850P-201ENST00000516934 103 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 MIR4500-201ENST00000579472 76 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 SNORA4-201ENST00000584302 138 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 AL353997.5-201ENST00000618886 171 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 MIR6873-201ENST00000622788 63 ntBASIC3.07□□□□□ -1.92
PRIM1P49642 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PRIM1P49642 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PRIM1P49642 Y_RNA.508-201ENST00000384502 114 ntBASIC3.06□□□□□ -1.92
PRIM1P49642 SNORA64-201ENST00000384674 134 ntBASIC3.06□□□□□ -1.92
PRIM1P49642 RNA5SP181-201ENST00000410246 98 ntBASIC3.06□□□□□ -1.92
PRIM1P49642 AC009474.2-201ENST00000451383 136 ntBASIC3.06□□□□□ -1.92
PRIM1P49642 Y_RNA.676-201ENST00000516393 96 ntBASIC3.06□□□□□ -1.92
PRIM1P49642 SNORD111.1-201ENST00000516421 86 ntBASIC3.06□□□□□ -1.92
PRIM1P49642 MAPK10-266ENST00000641066 6555 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 AC008163.1-202ENST00000636004 2889 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 RNU6-396P-201ENST00000365369 105 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 AC019129.1-201ENST00000403786 261 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 AC090255.1-201ENST00000495779 349 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 RNU7-41P-201ENST00000515917 61 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 RNU6-871P-201ENST00000516122 100 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 AC138749.4-201ENST00000563970 127 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 MIR4796-201ENST00000580742 81 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 MIR4264-201ENST00000583520 66 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 AC067747.1-201ENST00000608026 250 ntBASIC3.05□□□□□ -1.92
PRIM1P49642 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRIM1P49642 RNU6-478P-201ENST00000363904 110 ntBASIC3.04□□□□□ -1.92
PRIM1P49642 SNORA67.3-201ENST00000384366 140 ntBASIC3.04□□□□□ -1.92
PRIM1P49642 SNORA31.17-201ENST00000516953 127 ntBASIC3.04□□□□□ -1.92
PRIM1P49642 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.04□□□□□ -1.92
PRIM1P49642 MIR5092-201ENST00000583139 88 ntBASIC3.04□□□□□ -1.92
PRIM1P49642 AL137847.3-201ENST00000611521 109 ntBASIC3.04□□□□□ -1.92
PRIM1P49642 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 MIRLET7A1-201ENST00000362295 80 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 SNORA63.2-201ENST00000362603 126 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 VTRNA1-1-201ENST00000363120 99 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 Y_RNA.264-201ENST00000364665 102 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 MIR194-1-201ENST00000384892 85 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 MIR588-201ENST00000384900 83 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 MIR563-201ENST00000385080 79 ntBASIC3.03□□□□□ -1.92
PRIM1P49642 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PRIM1P49642 RNU6-811P-201ENST00000384069 107 ntBASIC3.02□□□□□ -1.93
PRIM1P49642 MT-TN-201ENST00000387400 73 ntBASIC3.02□□□□□ -1.93
PRIM1P49642 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.02□□□□□ -1.93
PRIM1P49642 RNU6-807P-201ENST00000516805 107 ntBASIC3.02□□□□□ -1.93
PRIM1P49642 MIR1297-201ENST00000637311 77 ntBASIC3.02□□□□□ -1.93
PRIM1P49642 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRIM1P49642 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRIM1P49642 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.01□□□□□ -1.93
PRIM1P49642 MT-TF-201ENST00000387314 71 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 MIR548U-201ENST00000390728 81 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 RNU6-1254P-201ENST00000391266 104 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 AL450471.1-201ENST00000447509 127 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 MIR5007-201ENST00000583098 95 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 MIR4536-1-201ENST00000583537 88 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 U6.109-201ENST00000636749 87 ntBASIC3.01□□□□□ -1.93
PRIM1P49642 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
PRIM1P49642 Y_RNA.119-201ENST00000363301 96 ntBASIC3□□□□□ -1.93
PRIM1P49642 RNU6-53P-201ENST00000365367 106 ntBASIC3□□□□□ -1.93
PRIM1P49642 RNU6-411P-201ENST00000384451 107 ntBASIC3□□□□□ -1.93
PRIM1P49642 RNU6-243P-201ENST00000391140 107 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms