Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-396P-201ENST00000365369 105 ntBASIC0.93□□□□□ -2.26
SHC1P29353 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
SHC1P29353 RNU6-342P-201ENST00000384521 104 ntBASIC0.93□□□□□ -2.26
SHC1P29353 SNORA75.2-201ENST00000391138 150 ntBASIC0.93□□□□□ -2.26
SHC1P29353 SNORA75.3-201ENST00000391231 150 ntBASIC0.93□□□□□ -2.26
SHC1P29353 MIR1287-201ENST00000408492 90 ntBASIC0.93□□□□□ -2.26
SHC1P29353 RNA5SP95-201ENST00000410319 137 ntBASIC0.93□□□□□ -2.26
SHC1P29353 RNA5SP136-201ENST00000410906 107 ntBASIC0.93□□□□□ -2.26
SHC1P29353 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.93□□□□□ -2.26
SHC1P29353 RNU7-113P-201ENST00000459273 62 ntBASIC0.93□□□□□ -2.26
SHC1P29353 MIR1270-201ENST00000459320 83 ntBASIC0.93□□□□□ -2.26
SHC1P29353 AC113410.1-201ENST00000505029 247 ntBASIC0.93□□□□□ -2.26
SHC1P29353 SNORD33.1-201ENST00000516213 88 ntBASIC0.93□□□□□ -2.26
SHC1P29353 AL359881.1-201ENST00000602916 267 ntBASIC0.93□□□□□ -2.26
SHC1P29353 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
SHC1P29353 MIR6504-201ENST00000613520 61 ntBASIC0.93□□□□□ -2.26
SHC1P29353 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
SHC1P29353 RNU6-1081P-201ENST00000384537 107 ntBASIC0.92□□□□□ -2.26
SHC1P29353 RNU6-1237P-201ENST00000384777 107 ntBASIC0.92□□□□□ -2.26
SHC1P29353 RNU6-205P-201ENST00000390858 107 ntBASIC0.92□□□□□ -2.26
SHC1P29353 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.92□□□□□ -2.26
SHC1P29353 RNU6-893P-201ENST00000458841 100 ntBASIC0.92□□□□□ -2.26
SHC1P29353 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.92□□□□□ -2.26
SHC1P29353 RNA5SP33-201ENST00000516687 98 ntBASIC0.92□□□□□ -2.26
SHC1P29353 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.92□□□□□ -2.26
SHC1P29353 uc_338.6-201ENST00000613544 171 ntBASIC0.92□□□□□ -2.26
SHC1P29353 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
SHC1P29353 Y_RNA.346-201ENST00000365385 112 ntBASIC0.91□□□□□ -2.26
SHC1P29353 Y_RNA.354-201ENST00000365448 111 ntBASIC0.91□□□□□ -2.26
SHC1P29353 MIR548A1-201ENST00000385041 97 ntBASIC0.91□□□□□ -2.26
SHC1P29353 RNU6-910P-201ENST00000390844 107 ntBASIC0.91□□□□□ -2.26
SHC1P29353 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
SHC1P29353 COX6CP6-201ENST00000490840 228 ntBASIC0.91□□□□□ -2.26
SHC1P29353 RNU11-2P-201ENST00000516898 142 ntBASIC0.91□□□□□ -2.26
SHC1P29353 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
SHC1P29353 MIR548AI-201ENST00000579940 88 ntBASIC0.91□□□□□ -2.26
SHC1P29353 MIR548AE2-201ENST00000583456 67 ntBASIC0.91□□□□□ -2.26
SHC1P29353 MIR6740-201ENST00000618268 113 ntBASIC0.91□□□□□ -2.26
SHC1P29353 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
SHC1P29353 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
SHC1P29353 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SHC1P29353 RNU6-580P-201ENST00000365159 107 ntBASIC0.9□□□□□ -2.27
SHC1P29353 Y_RNA.330-201ENST00000365230 109 ntBASIC0.9□□□□□ -2.27
SHC1P29353 SNORA32-201ENST00000384072 121 ntBASIC0.9□□□□□ -2.27
SHC1P29353 SNORA25-201ENST00000384384 134 ntBASIC0.9□□□□□ -2.27
SHC1P29353 SNORA18-201ENST00000384416 132 ntBASIC0.9□□□□□ -2.27
SHC1P29353 RNU6-429P-201ENST00000384582 108 ntBASIC0.9□□□□□ -2.27
SHC1P29353 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SHC1P29353 RNU6-613P-201ENST00000410412 108 ntBASIC0.9□□□□□ -2.27
SHC1P29353 Y_RNA.649-201ENST00000459077 103 ntBASIC0.9□□□□□ -2.27
SHC1P29353 snoU13.2-201ENST00000459201 104 ntBASIC0.9□□□□□ -2.27
SHC1P29353 OR2A41P-201ENST00000473586 105 ntBASIC0.9□□□□□ -2.27
SHC1P29353 MIR2115-201ENST00000516657 100 ntBASIC0.9□□□□□ -2.27
SHC1P29353 SEPT14P17-201ENST00000617978 177 ntBASIC0.9□□□□□ -2.27
SHC1P29353 AC087741.2-201ENST00000619415 172 ntBASIC0.9□□□□□ -2.27
SHC1P29353 U6.95-201ENST00000636931 70 ntBASIC0.9□□□□□ -2.27
SHC1P29353 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SHC1P29353 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
SHC1P29353 MIR588-201ENST00000384900 83 ntBASIC0.89□□□□□ -2.27
SHC1P29353 MT-TN-201ENST00000387400 73 ntBASIC0.89□□□□□ -2.27
SHC1P29353 snoU13.21-201ENST00000459368 105 ntBASIC0.89□□□□□ -2.27
SHC1P29353 RNU7-21P-201ENST00000459430 62 ntBASIC0.89□□□□□ -2.27
SHC1P29353 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
SHC1P29353 RNU7-6P-201ENST00000516845 62 ntBASIC0.89□□□□□ -2.27
SHC1P29353 AC036111.3-201ENST00000526389 112 ntBASIC0.89□□□□□ -2.27
SHC1P29353 AC027335.2-201ENST00000624030 375 ntBASIC0.89□□□□□ -2.27
SHC1P29353 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.89□□□□□ -2.27
SHC1P29353 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SHC1P29353 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
SHC1P29353 RNU6-1144P-201ENST00000384247 104 ntBASIC0.88□□□□□ -2.27
SHC1P29353 MIR563-201ENST00000385080 79 ntBASIC0.88□□□□□ -2.27
SHC1P29353 MIR548A3-201ENST00000385297 97 ntBASIC0.88□□□□□ -2.27
SHC1P29353 RNU6-1064P-201ENST00000410626 104 ntBASIC0.88□□□□□ -2.27
SHC1P29353 RNU4-69P-201ENST00000410677 143 ntBASIC0.88□□□□□ -2.27
SHC1P29353 RNU7-35P-201ENST00000517174 62 ntBASIC0.88□□□□□ -2.27
SHC1P29353 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.88□□□□□ -2.27
SHC1P29353 MTND5P34-201ENST00000568888 325 ntBASIC0.88□□□□□ -2.27
SHC1P29353 MIR4264-201ENST00000583520 66 ntBASIC0.88□□□□□ -2.27
SHC1P29353 AL670379.3-201ENST00000605040 251 ntBASIC0.88□□□□□ -2.27
SHC1P29353 Y_RNA.773-201ENST00000607168 90 ntBASIC0.88□□□□□ -2.27
SHC1P29353 MIR6129-201ENST00000616087 109 ntBASIC0.88□□□□□ -2.27
SHC1P29353 AL589743.1-201ENST00000551932 2712 ntBASIC0.87□□□□□ -2.27
SHC1P29353 Y_RNA.191-201ENST00000363972 113 ntBASIC0.87□□□□□ -2.27
SHC1P29353 Y_RNA.213-201ENST00000364178 111 ntBASIC0.87□□□□□ -2.27
SHC1P29353 Y_RNA.344-201ENST00000365381 112 ntBASIC0.87□□□□□ -2.27
SHC1P29353 SNORA80D-201ENST00000384488 135 ntBASIC0.87□□□□□ -2.27
SHC1P29353 Y_RNA.549-201ENST00000384657 102 ntBASIC0.87□□□□□ -2.27
SHC1P29353 RNU7-79P-201ENST00000516082 62 ntBASIC0.87□□□□□ -2.27
SHC1P29353 SNORA70.22-201ENST00000517160 124 ntBASIC0.87□□□□□ -2.27
SHC1P29353 AC007012.1-201ENST00000567192 175 ntBASIC0.87□□□□□ -2.27
SHC1P29353 AC023827.1-201ENST00000569247 97 ntBASIC0.87□□□□□ -2.27
SHC1P29353 AP000753.3-201ENST00000604083 169 ntBASIC0.87□□□□□ -2.27
SHC1P29353 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
SHC1P29353 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
SHC1P29353 MIR30D-201ENST00000362283 70 ntBASIC0.86□□□□□ -2.27
SHC1P29353 Y_RNA.273-201ENST00000364703 102 ntBASIC0.86□□□□□ -2.27
SHC1P29353 Y_RNA.299-201ENST00000364973 94 ntBASIC0.86□□□□□ -2.27
SHC1P29353 RNY1P13-201ENST00000365030 105 ntBASIC0.86□□□□□ -2.27
SHC1P29353 SNORD114-22-201ENST00000365423 72 ntBASIC0.86□□□□□ -2.27
SHC1P29353 SNORD20-201ENST00000384550 80 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms