Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.27□□□□□ -2.37
COL5A3P25940 AC091932.4-201ENST00000623386 200 ntBASIC0.27□□□□□ -2.37
COL5A3P25940 SNORD18A-201ENST00000363753 72 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 Y_RNA.288-201ENST00000364854 92 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-447P-201ENST00000410293 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-1118P-201ENST00000410382 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-1076P-201ENST00000410397 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-355P-201ENST00000410427 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-791P-201ENST00000410467 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-705P-201ENST00000410601 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU4-43P-201ENST00000410628 137 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-1100P-201ENST00000410691 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-860P-201ENST00000410860 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU5E-9P-201ENST00000411164 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-1217P-201ENST00000411276 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU6-785P-201ENST00000411324 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.26□□□□□ -2.37
COL5A3P25940 MTND2P23-201ENST00000422990 651 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 AL118496.2-201ENST00000448300 230 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RPL39P25-201ENST00000449384 154 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 AC067940.1-201ENST00000458411 300 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU7-62P-201ENST00000458856 62 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU7-102P-201ENST00000458948 62 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 Y_RNA.797-201ENST00000515977 94 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 RNU7-156P-201ENST00000517214 74 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 AC090897.1-201ENST00000580909 226 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 AL365205.2-201ENST00000594586 68 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 uc_338.6-201ENST00000613544 171 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 U6.90-201ENST00000614007 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 U6.70-201ENST00000620287 104 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 MIR6717-201ENST00000622747 73 ntBASIC0.26□□□□□ -2.37
COL5A3P25940 Y_RNA.149-201ENST00000363558 117 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 SNORA20.1-201ENST00000364790 130 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 SNORA36.2-201ENST00000384004 127 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 RNU6-196P-201ENST00000384315 107 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 MIR624-201ENST00000385217 97 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 RNU6-679P-201ENST00000391003 106 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 MIR548I3-201ENST00000408378 149 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 SEPT7P4-201ENST00000437076 306 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 RNU6-448P-201ENST00000517052 107 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 MIR4491-201ENST00000581087 68 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 SNORD92-201ENST00000585078 85 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 MTND5P32-201ENST00000560711 1802 ntBASIC0.25□□□□□ -2.37
COL5A3P25940 SNORD114-31-201ENST00000363219 75 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU6-312P-201ENST00000364629 107 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU6-588P-201ENST00000410281 105 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNA5SP261-201ENST00000410536 106 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU7-45P-201ENST00000459460 63 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU7-96P-201ENST00000459535 64 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU7-53P-201ENST00000516705 60 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 MIR4308-201ENST00000580634 81 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 U2.14-201ENST00000615943 113 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 U6.106-201ENST00000636360 105 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 MIR6844-201ENST00000637122 62 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 MIR377-201ENST00000362145 69 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 Y_RNA.75-201ENST00000362927 97 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU6-1082P-201ENST00000364574 107 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU6-597P-201ENST00000365620 102 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU6-1292P-201ENST00000383856 107 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 SNORD24-201ENST00000383884 75 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 Y_RNA.440-201ENST00000384120 114 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 Y_RNA.447-201ENST00000384184 113 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 MIR563-201ENST00000385080 79 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 AC015818.7-201ENST00000428754 109 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 AC087499.7-201ENST00000441958 109 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU6-893P-201ENST00000458841 100 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 SNORA25.12-201ENST00000516202 82 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 RNU4-71P-201ENST00000516258 113 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.24□□□□□ -2.37
COL5A3P25940 MIR4676-201ENST00000583078 72 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 AC008608.1-201ENST00000603910 127 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 AC141273.2-201ENST00000618989 130 ntBASIC0.24□□□□□ -2.37
COL5A3P25940 MIR18A-201ENST00000362310 71 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 RNU6-349P-201ENST00000362402 107 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 RNU6-949P-201ENST00000384040 107 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 Y_RNA.430-201ENST00000384081 110 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 MIR588-201ENST00000384900 83 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 MIR938-201ENST00000401216 83 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 RNU6-1165P-201ENST00000410119 107 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 MTND3P2-201ENST00000438452 342 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 SCARNA15-202ENST00000516881 127 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.23□□□□□ -2.37
COL5A3P25940 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.23□□□□□ -2.37
COL5A3P25940 Y_RNA.83-201ENST00000363005 113 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 RNU6-379P-201ENST00000363813 104 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 RNU6-47P-201ENST00000383866 107 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 RNU6-1336P-201ENST00000383886 109 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 Y_RNA.542-201ENST00000384641 111 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 Y_RNA.556-201ENST00000384677 113 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 RNU6-768P-201ENST00000384683 107 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 MT-TF-201ENST00000387314 71 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 RNU6-918P-201ENST00000391219 106 ntBASIC0.22□□□□□ -2.37
COL5A3P25940 MIR548H3-201ENST00000408771 118 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 224.2 ms