Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR548I2-201ENST00000408348 149 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-447P-201ENST00000410293 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-1118P-201ENST00000410382 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-1076P-201ENST00000410397 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-355P-201ENST00000410427 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-791P-201ENST00000410467 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-705P-201ENST00000410601 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-735P-201ENST00000410612 107 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-1100P-201ENST00000410691 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU4-53P-201ENST00000410828 140 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-860P-201ENST00000410860 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU4-83P-201ENST00000410863 133 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-1217P-201ENST00000411276 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-785P-201ENST00000411324 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.52□□□□□ -2.17
VAMP1P23763 RNU6-412P-201ENST00000516434 106 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 RNU7-137P-201ENST00000516788 62 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 U6.90-201ENST00000614007 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 AC087741.2-201ENST00000619415 172 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 U6.70-201ENST00000620287 104 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 AC064859.1-201ENST00000624741 174 ntBASIC1.52□□□□□ -2.17
VAMP1P23763 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VAMP1P23763 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VAMP1P23763 SNORA63.5-201ENST00000363548 123 ntBASIC1.51□□□□□ -2.17
VAMP1P23763 Y_RNA.155-201ENST00000363632 101 ntBASIC1.51□□□□□ -2.17
VAMP1P23763 RNU1-124P-201ENST00000363861 145 ntBASIC1.51□□□□□ -2.17
VAMP1P23763 Y_RNA.291-201ENST00000364886 113 ntBASIC1.51□□□□□ -2.17
VAMP1P23763 MIR520F-201ENST00000384824 87 ntBASIC1.51□□□□□ -2.17
VAMP1P23763 MIR938-201ENST00000401216 83 ntBASIC1.51□□□□□ -2.17
VAMP1P23763 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VAMP1P23763 RNU6-834P-201ENST00000362367 110 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 RNU1-36P-201ENST00000365130 165 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 Y_RNA.362-201ENST00000365518 110 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 Y_RNA.448-201ENST00000384185 108 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 RNU6-1144P-201ENST00000384247 104 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 SNORA64-201ENST00000384674 134 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 MIR504-201ENST00000385065 83 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 U8.15-201ENST00000390947 134 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 RNU7-2P-201ENST00000516096 62 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 MIR4676-201ENST00000583078 72 ntBASIC1.5□□□□□ -2.17
VAMP1P23763 SNORD115-19-201ENST00000363098 82 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 SNORD115-18-201ENST00000363293 82 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 SNORD115-17-201ENST00000364612 82 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 MIR206-201ENST00000384872 86 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 MIR125B2-201ENST00000385128 89 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 MIR219B-201ENST00000637023 88 ntBASIC1.49□□□□□ -2.17
VAMP1P23763 Y_RNA.49-201ENST00000362714 112 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 Y_RNA.273-201ENST00000364703 102 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 Y_RNA.309-201ENST00000365046 111 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 RNU1-119P-201ENST00000391122 165 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 MIR1827-201ENST00000408549 66 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 MIR1912-201ENST00000410389 80 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 SNORA7.5-201ENST00000410672 110 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 U7.7-201ENST00000459276 60 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 PDCD5P2-201ENST00000507570 312 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 RNU6-1110P-201ENST00000516462 101 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 RNU7-156P-201ENST00000517214 74 ntBASIC1.48□□□□□ -2.17
VAMP1P23763 Y_RNA.98-201ENST00000363109 102 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 RNU4-67P-201ENST00000364569 141 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 Y_RNA.344-201ENST00000365381 112 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 RNU6-816P-201ENST00000390914 107 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 RNU6-1268P-201ENST00000391214 107 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 RNU6-1239P-201ENST00000391310 107 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 RPL39P34-201ENST00000477141 156 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.47□□□□□ -2.17
VAMP1P23763 MIR6715A-201ENST00000615929 79 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 U6.109-201ENST00000636749 87 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 AL512310.12-203ENST00000640543 90 ntBASIC1.47□□□□□ -2.17
VAMP1P23763 SNORD115-35-201ENST00000365122 82 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 RNU6-409P-201ENST00000384114 104 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 Y_RNA.629-201ENST00000411368 105 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 RNU7-48P-201ENST00000458875 63 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 snoU13.26-201ENST00000459452 105 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 MIR4679-2-201ENST00000578358 77 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 AC025627.3-201ENST00000582078 182 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.46□□□□□ -2.18
VAMP1P23763 AC020891.4-201ENST00000605745 93 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 Y_RNA.773-201ENST00000607168 90 ntBASIC1.46□□□□□ -2.18
VAMP1P23763 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.46□□□□□ -2.18
VAMP1P23763 AL391516.1-201ENST00000554380 2449 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 RNA5SP133-201ENST00000363368 119 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VAMP1P23763 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 MIR1270-201ENST00000459320 83 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 RNU6-237P-201ENST00000515985 71 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 RNU6-521P-201ENST00000516663 105 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 MIR1273D-201ENST00000577266 86 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 MIR6129-201ENST00000616087 109 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 MIR1255B1-201ENST00000636325 63 ntBASIC1.45□□□□□ -2.18
VAMP1P23763 RNU6-1321P-201ENST00000390905 107 ntBASIC1.44□□□□□ -2.18
VAMP1P23763 RNU1-41P-201ENST00000516161 162 ntBASIC1.44□□□□□ -2.18
VAMP1P23763 RNU1-48P-201ENST00000516400 162 ntBASIC1.44□□□□□ -2.18
VAMP1P23763 MIR4648-201ENST00000580107 72 ntBASIC1.44□□□□□ -2.18
VAMP1P23763 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.44□□□□□ -2.18
VAMP1P23763 AL162726.3-218ENST00000636401 95 ntBASIC1.44□□□□□ -2.18
VAMP1P23763 ZNF355P-201ENST00000427301 3216 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms