Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC007012.1-201ENST00000567192 175 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 SNORA80D-201ENST00000384488 135 ntBASIC1.37□□□□□ -2.19
FOXN3O00409 AL591704.2-201ENST00000421658 181 ntBASIC1.37□□□□□ -2.19
FOXN3O00409 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXN3O00409 RNU7-6P-201ENST00000516845 62 ntBASIC1.37□□□□□ -2.19
FOXN3O00409 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
FOXN3O00409 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
FOXN3O00409 MIR337-201ENST00000362281 93 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 Y_RNA.531-201ENST00000384589 121 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 SNORD12C-201ENST00000386307 89 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
FOXN3O00409 RNA5SP33-201ENST00000516687 98 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 AC023827.1-201ENST00000569247 97 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 MIR548AE2-201ENST00000583456 67 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 uc_338.28-201ENST00000612082 187 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 MIR6841-201ENST00000637129 72 ntBASIC1.36□□□□□ -2.19
FOXN3O00409 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
FOXN3O00409 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FOXN3O00409 Y_RNA.344-201ENST00000365381 112 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 Y_RNA.362-201ENST00000365518 110 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 RNU6-342P-201ENST00000384521 104 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 RNU6-1237P-201ENST00000384777 107 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MIR759-201ENST00000390224 91 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MIR1302-7-201ENST00000408841 72 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 RNA5SP95-201ENST00000410319 137 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 RPS3AP1-201ENST00000413190 320 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MTATP6P29-201ENST00000415057 132 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MIR3152-201ENST00000579801 74 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 MIR8070-201ENST00000616510 88 ntBASIC1.35□□□□□ -2.19
FOXN3O00409 RNY1P10-201ENST00000363268 113 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 MRPL35P3-201ENST00000421557 364 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 RPS23P4-201ENST00000487908 423 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 AC113410.1-201ENST00000505029 247 ntBASIC1.34□□□□□ -2.19
FOXN3O00409 MIR450A1-201ENST00000362262 91 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 RNU6-396P-201ENST00000365369 105 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 MIR548D2-201ENST00000384955 97 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 MIR1270-201ENST00000459320 83 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.33□□□□□ -2.2
FOXN3O00409 PDCD5P2-201ENST00000507570 312 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 MIR3163-201ENST00000581592 73 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.33□□□□□ -2.2
FOXN3O00409 Y_RNA.773-201ENST00000607168 90 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 SEPT14P17-201ENST00000617978 177 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 MIR6516-201ENST00000630554 81 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 Z97988.1-201ENST00000637697 135 ntBASIC1.33□□□□□ -2.2
FOXN3O00409 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 SNORA18-201ENST00000384416 132 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 RNA5SP261-201ENST00000410536 106 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 MIR2115-201ENST00000516657 100 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 MIR1255B1-201ENST00000636325 63 ntBASIC1.32□□□□□ -2.2
FOXN3O00409 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.31□□□□□ -2.2
FOXN3O00409 Y_RNA.116-201ENST00000363292 103 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 RNU6-153P-201ENST00000364422 104 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 RNU6-1107P-201ENST00000364817 104 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 SNORA2B-201ENST00000384583 137 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 RNU7-90P-201ENST00000459216 62 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
FOXN3O00409 RNY4P6-201ENST00000363667 96 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 Y_RNA.430-201ENST00000384081 110 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 RNU6-616P-201ENST00000384353 107 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 RNU4-69P-201ENST00000410677 143 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 AC087741.2-201ENST00000619415 172 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 MIR7111-201ENST00000619751 72 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 AL589743.1-201ENST00000551932 2712 ntBASIC1.3□□□□□ -2.2
FOXN3O00409 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
FOXN3O00409 Y_RNA.85-201ENST00000363014 111 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 SNORA25.9-201ENST00000365087 128 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 Y_RNA.327-201ENST00000365201 102 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 SNORD38B-201ENST00000384690 67 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 MIR499A-201ENST00000384903 122 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 RNU6-554P-201ENST00000410466 106 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 RPL39P34-201ENST00000477141 156 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.29□□□□□ -2.2
FOXN3O00409 AP000753.3-201ENST00000604083 169 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 SNORD38B-202ENST00000625943 69 ntBASIC1.29□□□□□ -2.2
FOXN3O00409 Y_RNA.281-201ENST00000364774 94 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 U8.6-201ENST00000364939 135 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 AC244023.1-201ENST00000426884 112 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 RPL39P25-201ENST00000449384 154 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 RNU6-893P-201ENST00000458841 100 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 AC242498.1-201ENST00000604134 111 ntBASIC1.28□□□□□ -2.2
FOXN3O00409 RNU6-147P-201ENST00000383983 107 ntBASIC1.27□□□□□ -2.21
FOXN3O00409 RNU6-106P-201ENST00000384405 107 ntBASIC1.27□□□□□ -2.21
FOXN3O00409 RNU6-816P-201ENST00000390914 107 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms