Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV20A0A0B4J274 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 MIR30D-201ENST00000362283 70 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-816P-201ENST00000390914 107 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-1268P-201ENST00000391214 107 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-1239P-201ENST00000391310 107 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 MIR1912-201ENST00000410389 80 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 AL603825.1-201ENST00000438481 80 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RPL39P25-201ENST00000449384 154 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 AC023827.1-201ENST00000569247 97 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 SNORA4-201ENST00000584302 138 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 uc_338.6-201ENST00000613544 171 ntBASIC1.57□□□□□ -2.16
TRAV20A0A0B4J274 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 RNU4-67P-201ENST00000364569 141 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-949P-201ENST00000384040 107 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 MT-TF-201ENST00000387314 71 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 RNU7-90P-201ENST00000459216 62 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 RNU7-137P-201ENST00000516788 62 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 AC068339.1-201ENST00000526965 141 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 AC012676.2-201ENST00000619258 186 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 AC008163.1-202ENST00000636004 2889 ntBASIC1.56□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-363P-201ENST00000362895 105 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 Y_RNA.81-201ENST00000362997 102 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 SNORD114-10-201ENST00000363409 72 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 U8.6-201ENST00000364939 135 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 MIR206-201ENST00000384872 86 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 RNU7-2P-201ENST00000516096 62 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 AC106800.4-201ENST00000614905 153 ntBASIC1.55□□□□□ -2.16
TRAV20A0A0B4J274 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 Y_RNA.155-201ENST00000363632 101 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 SNORA25-201ENST00000384384 134 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 SNORD12-201ENST00000391002 90 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 SNORD111-201ENST00000408139 94 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 SNORA25.15-201ENST00000516487 89 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 MIR5009-201ENST00000578736 100 ntBASIC1.54□□□□□ -2.16
TRAV20A0A0B4J274 SNORA63.4-201ENST00000362763 126 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 SNORD115-35-201ENST00000365122 82 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 Y_RNA.323-201ENST00000365157 109 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-1014P-201ENST00000383940 103 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 SNORA7.5-201ENST00000410672 110 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 MIR18B-201ENST00000454574 71 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 RNU6-521P-201ENST00000516663 105 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 AC105081.1-201ENST00000617727 106 ntBASIC1.53□□□□□ -2.16
TRAV20A0A0B4J274 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 Y_RNA.116-201ENST00000363292 103 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-409P-201ENST00000384114 104 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 snoU13.21-201ENST00000459368 105 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 PDCD5P2-201ENST00000507570 312 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-94P-201ENST00000607728 107 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 AC084768.2-201ENST00000622736 221 ntBASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-755P-201ENST00000364400 103 ntBASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 Y_RNA.448-201ENST00000384185 108 ntBASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-733P-201ENST00000410759 104 ntBASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 SNORD83.1-201ENST00000411362 77 ntBASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.51□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-934P-201ENST00000365154 107 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-1321P-201ENST00000390905 107 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 U8.15-201ENST00000390947 134 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-447P-201ENST00000410293 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-1118P-201ENST00000410382 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-1076P-201ENST00000410397 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-355P-201ENST00000410427 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-791P-201ENST00000410467 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-705P-201ENST00000410601 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-1100P-201ENST00000410691 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-860P-201ENST00000410860 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-1217P-201ENST00000411276 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-785P-201ENST00000411324 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 AC002429.1-201ENST00000437672 148 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 AC133485.1-201ENST00000567176 124 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 uc_338.28-201ENST00000612082 187 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 U6.90-201ENST00000614007 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 U6.70-201ENST00000620287 104 ntBASIC1.5□□□□□ -2.17
TRAV20A0A0B4J274 Y_RNA.163-201ENST00000363702 113 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-106P-201ENST00000384405 107 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 MIR1302-5-201ENST00000408164 150 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-994P-201ENST00000410507 111 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 AC023934.1-201ENST00000574529 2389 ntBASIC1.49□□□□□ -2.17
TRAV20A0A0B4J274 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV20A0A0B4J274 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV20A0A0B4J274 RNU6-865P-201ENST00000364772 107 ntBASIC1.48□□□□□ -2.17
TRAV20A0A0B4J274 Y_RNA.338-201ENST00000365320 114 ntBASIC1.48□□□□□ -2.17
TRAV20A0A0B4J274 MIR605-201ENST00000385078 83 ntBASIC1.48□□□□□ -2.17
TRAV20A0A0B4J274 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms